Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHFRQ96EP1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.92■□□□□ 0.46
CHFRQ96EP1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.92■□□□□ 0.46
CHFRQ96EP1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.92■□□□□ 0.46
CHFRQ96EP1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHFRQ96EP1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.92■□□□□ 0.46
CHFRQ96EP1 SIGLEC30P-201ENST00000455569 941 ntBASIC17.92■□□□□ 0.46
CHFRQ96EP1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.92■□□□□ 0.46
CHFRQ96EP1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.92■□□□□ 0.46
CHFRQ96EP1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.92■□□□□ 0.46
CHFRQ96EP1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CHFRQ96EP1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.92■□□□□ 0.46
CHFRQ96EP1 AC004790.2-201ENST00000623588 572 ntBASIC17.92■□□□□ 0.46
CHFRQ96EP1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CHFRQ96EP1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHFRQ96EP1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHFRQ96EP1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CHFRQ96EP1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHFRQ96EP1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHFRQ96EP1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CHFRQ96EP1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.92■□□□□ 0.46
CHFRQ96EP1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHFRQ96EP1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CHFRQ96EP1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHFRQ96EP1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
CHFRQ96EP1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHFRQ96EP1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHFRQ96EP1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHFRQ96EP1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHFRQ96EP1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.91■□□□□ 0.46
CHFRQ96EP1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHFRQ96EP1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHFRQ96EP1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHFRQ96EP1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CHFRQ96EP1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CHFRQ96EP1 OR7E47P-204ENST00000575924 449 ntBASIC17.91■□□□□ 0.46
CHFRQ96EP1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CHFRQ96EP1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.91■□□□□ 0.46
CHFRQ96EP1 AL596442.2-201ENST00000610240 980 ntBASIC17.91■□□□□ 0.46
CHFRQ96EP1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHFRQ96EP1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.91■□□□□ 0.46
CHFRQ96EP1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHFRQ96EP1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHFRQ96EP1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.91■□□□□ 0.46
CHFRQ96EP1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHFRQ96EP1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHFRQ96EP1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.91■□□□□ 0.46
CHFRQ96EP1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.91■□□□□ 0.46
CHFRQ96EP1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.91■□□□□ 0.46
CHFRQ96EP1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
CHFRQ96EP1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.91■□□□□ 0.46
CHFRQ96EP1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHFRQ96EP1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHFRQ96EP1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.9■□□□□ 0.46
CHFRQ96EP1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHFRQ96EP1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHFRQ96EP1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHFRQ96EP1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHFRQ96EP1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHFRQ96EP1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.9■□□□□ 0.46
CHFRQ96EP1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHFRQ96EP1 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.9■□□□□ 0.46
CHFRQ96EP1 PRSS29P-201ENST00000440800 595 ntBASIC17.9■□□□□ 0.46
CHFRQ96EP1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CHFRQ96EP1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CHFRQ96EP1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.9■□□□□ 0.46
CHFRQ96EP1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.9■□□□□ 0.46
CHFRQ96EP1 AC005829.1-201ENST00000570002 483 ntBASIC17.9■□□□□ 0.46
CHFRQ96EP1 MIR4469-201ENST00000583919 79 ntBASIC17.9■□□□□ 0.46
CHFRQ96EP1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.9■□□□□ 0.46
CHFRQ96EP1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHFRQ96EP1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHFRQ96EP1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.9■□□□□ 0.46
CHFRQ96EP1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CHFRQ96EP1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHFRQ96EP1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CHFRQ96EP1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHFRQ96EP1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHFRQ96EP1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHFRQ96EP1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHFRQ96EP1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
CHFRQ96EP1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHFRQ96EP1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.89■□□□□ 0.46
CHFRQ96EP1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHFRQ96EP1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHFRQ96EP1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.89■□□□□ 0.45
CHFRQ96EP1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CHFRQ96EP1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHFRQ96EP1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.89■□□□□ 0.45
CHFRQ96EP1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.89■□□□□ 0.45
CHFRQ96EP1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CHFRQ96EP1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.89■□□□□ 0.45
CHFRQ96EP1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.89■□□□□ 0.45
CHFRQ96EP1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.89■□□□□ 0.45
CHFRQ96EP1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.89■□□□□ 0.45
CHFRQ96EP1 AL805961.1-202ENST00000641562 540 ntBASIC17.89■□□□□ 0.45
CHFRQ96EP1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHFRQ96EP1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CHFRQ96EP1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHFRQ96EP1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms