Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 AL591424.1-201ENST00000442569 1213 ntBASIC19.11■□□□□ 0.65
PGBD4Q96DM1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 FAM197Y3-203ENST00000618346 717 ntBASIC19.11■□□□□ 0.65
PGBD4Q96DM1 AL589182.2-201ENST00000619332 1049 ntBASIC19.11■□□□□ 0.65
PGBD4Q96DM1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PGBD4Q96DM1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 AC090340.1-201ENST00000620778 4980 ntBASIC19.1■□□□□ 0.65
PGBD4Q96DM1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 AC003669.1-201ENST00000334569 611 ntBASIC19.1■□□□□ 0.65
PGBD4Q96DM1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 AC034105.1-201ENST00000563488 319 ntBASIC19.1■□□□□ 0.65
PGBD4Q96DM1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.1■□□□□ 0.65
PGBD4Q96DM1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 AL356488.2-201ENST00000602755 427 ntBASIC19.1■□□□□ 0.65
PGBD4Q96DM1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 AC004817.3-201ENST00000602957 2129 ntBASIC19.1■□□□□ 0.65
PGBD4Q96DM1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PGBD4Q96DM1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 KLF4P1-201ENST00000412782 1185 ntBASIC19.09■□□□□ 0.65
PGBD4Q96DM1 MED15P5-201ENST00000423150 992 ntBASIC19.09■□□□□ 0.65
PGBD4Q96DM1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 UNC93B6-202ENST00000528242 690 ntBASIC19.09■□□□□ 0.65
PGBD4Q96DM1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 AC005593.1-201ENST00000624894 515 ntBASIC19.09■□□□□ 0.65
PGBD4Q96DM1 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PGBD4Q96DM1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms