Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RFT1Q96AA3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RFT1Q96AA3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.69■□□□□ 0.1
RFT1Q96AA3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.69■□□□□ 0.1
RFT1Q96AA3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 AL356309.3-201ENST00000624132 1934 ntBASIC15.69■□□□□ 0.1
RFT1Q96AA3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RFT1Q96AA3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.69■□□□□ 0.1
RFT1Q96AA3 RBM17P1-201ENST00000453646 1190 ntBASIC15.69■□□□□ 0.1
RFT1Q96AA3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.69■□□□□ 0.1
RFT1Q96AA3 AP005242.2-201ENST00000580065 1175 ntBASIC15.69■□□□□ 0.1
RFT1Q96AA3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.69■□□□□ 0.1
RFT1Q96AA3 AP000525.1-201ENST00000608286 694 ntBASIC15.69■□□□□ 0.1
RFT1Q96AA3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.69■□□□□ 0.1
RFT1Q96AA3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.69■□□□□ 0.1
RFT1Q96AA3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RFT1Q96AA3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RFT1Q96AA3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFT1Q96AA3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFT1Q96AA3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFT1Q96AA3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFT1Q96AA3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFT1Q96AA3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFT1Q96AA3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFT1Q96AA3 DOC2GP-204ENST00000639052 2548 ntBASIC15.68■□□□□ 0.1
RFT1Q96AA3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFT1Q96AA3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFT1Q96AA3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFT1Q96AA3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 UNC93B2-201ENST00000285383 730 ntBASIC15.68■□□□□ 0.1
RFT1Q96AA3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFT1Q96AA3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFT1Q96AA3 MIR149-201ENST00000384879 89 ntBASIC15.68■□□□□ 0.1
RFT1Q96AA3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 CR769767.2-201ENST00000622735 460 ntBASIC15.68■□□□□ 0.1
RFT1Q96AA3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFT1Q96AA3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFT1Q96AA3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.68■□□□□ 0.1
RFT1Q96AA3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFT1Q96AA3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFT1Q96AA3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFT1Q96AA3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFT1Q96AA3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
RFT1Q96AA3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RFT1Q96AA3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.67■□□□□ 0.1
RFT1Q96AA3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFT1Q96AA3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RFT1Q96AA3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
RFT1Q96AA3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms