Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
CASKIN1Q8WXD9 AC004408.2-201ENST00000623613 2777 ntBASIC27.23■■□□□ 1.95
CASKIN1Q8WXD9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
CASKIN1Q8WXD9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC27.22■■□□□ 1.95
CASKIN1Q8WXD9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC27.22■■□□□ 1.95
CASKIN1Q8WXD9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC27.22■■□□□ 1.95
CASKIN1Q8WXD9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC27.22■■□□□ 1.95
CASKIN1Q8WXD9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CASKIN1Q8WXD9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CASKIN1Q8WXD9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CASKIN1Q8WXD9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
CASKIN1Q8WXD9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
CASKIN1Q8WXD9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC27.22■■□□□ 1.95
CASKIN1Q8WXD9 ACTL9-202ENST00000612068 1252 ntBASIC27.22■■□□□ 1.95
CASKIN1Q8WXD9 AC079781.4-201ENST00000641908 219 ntBASIC27.22■■□□□ 1.95
CASKIN1Q8WXD9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CASKIN1Q8WXD9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CASKIN1Q8WXD9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CASKIN1Q8WXD9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
CASKIN1Q8WXD9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CASKIN1Q8WXD9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CASKIN1Q8WXD9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CASKIN1Q8WXD9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CASKIN1Q8WXD9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC27.21■■□□□ 1.95
CASKIN1Q8WXD9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
CASKIN1Q8WXD9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC27.21■■□□□ 1.95
CASKIN1Q8WXD9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC27.21■■□□□ 1.95
CASKIN1Q8WXD9 AC104581.1-202ENST00000635932 2618 ntBASIC27.21■■□□□ 1.95
CASKIN1Q8WXD9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC27.21■■□□□ 1.95
CASKIN1Q8WXD9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC27.21■■□□□ 1.95
CASKIN1Q8WXD9 LINC01451-201ENST00000623792 534 ntBASIC27.21■■□□□ 1.95
CASKIN1Q8WXD9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CASKIN1Q8WXD9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC27.21■■□□□ 1.95
CASKIN1Q8WXD9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC27.21■■□□□ 1.95
CASKIN1Q8WXD9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
CASKIN1Q8WXD9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC27.2■■□□□ 1.95
CASKIN1Q8WXD9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC27.2■■□□□ 1.95
CASKIN1Q8WXD9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC27.2■■□□□ 1.95
CASKIN1Q8WXD9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 HMGN1P19-201ENST00000436976 333 ntBASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 AC087163.2-201ENST00000457299 853 ntBASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 SLC25A6P2-201ENST00000497974 877 ntBASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 AC027612.4-201ENST00000605371 583 ntBASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 BCAR1-209ENST00000546196 1340 ntBASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC27.2■■□□□ 1.94
CASKIN1Q8WXD9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 CYP51A1P2-201ENST00000419457 1499 ntBASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 ADH5P3-201ENST00000433842 1137 ntBASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 AL031432.2-201ENST00000566714 459 ntBASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 AL928711.1-201ENST00000570165 459 ntBASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
CASKIN1Q8WXD9 AL354751.1-201ENST00000412768 1863 ntBASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC27.18■■□□□ 1.94
CASKIN1Q8WXD9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
CASKIN1Q8WXD9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms