Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSMEM1Q8WWF3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSMEM1Q8WWF3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.68□□□□□ -0.06
SSMEM1Q8WWF3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSMEM1Q8WWF3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSMEM1Q8WWF3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSMEM1Q8WWF3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSMEM1Q8WWF3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSMEM1Q8WWF3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSMEM1Q8WWF3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSMEM1Q8WWF3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSMEM1Q8WWF3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SSMEM1Q8WWF3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.68□□□□□ -0.06
SSMEM1Q8WWF3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSMEM1Q8WWF3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 KRT17P6-201ENST00000453795 1220 ntBASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 KRT18P31-201ENST00000506277 1292 ntBASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 AC011840.4-201ENST00000578471 627 ntBASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 AC009102.3-201ENST00000623118 1491 ntBASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 AC106820.2-201ENST00000563775 3264 ntBASIC14.67□□□□□ -0.06
SSMEM1Q8WWF3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 LINC00167-201ENST00000530583 1419 ntBASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 AC246785.2-201ENST00000432512 513 ntBASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.66□□□□□ -0.06
SSMEM1Q8WWF3 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms