Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
STAG1Q8WVM7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
STAG1Q8WVM7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
STAG1Q8WVM7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.78■□□□□ 0.92
STAG1Q8WVM7 MRPL3P1-201ENST00000400109 1033 ntBASIC20.78■□□□□ 0.92
STAG1Q8WVM7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
STAG1Q8WVM7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
STAG1Q8WVM7 IGHV3-52-201ENST00000519770 353 ntBASIC20.78■□□□□ 0.92
STAG1Q8WVM7 MTDHP3-201ENST00000594186 672 ntBASIC20.78■□□□□ 0.92
STAG1Q8WVM7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
STAG1Q8WVM7 AC073592.4-201ENST00000623827 446 ntBASIC20.78■□□□□ 0.92
STAG1Q8WVM7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
STAG1Q8WVM7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
STAG1Q8WVM7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.78■□□□□ 0.92
STAG1Q8WVM7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
STAG1Q8WVM7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
STAG1Q8WVM7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.78■□□□□ 0.92
STAG1Q8WVM7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.78■□□□□ 0.92
STAG1Q8WVM7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
STAG1Q8WVM7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
STAG1Q8WVM7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
STAG1Q8WVM7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
STAG1Q8WVM7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
STAG1Q8WVM7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
STAG1Q8WVM7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
STAG1Q8WVM7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.77■□□□□ 0.92
STAG1Q8WVM7 MYCLP1-201ENST00000372451 1075 ntBASIC20.77■□□□□ 0.92
STAG1Q8WVM7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
STAG1Q8WVM7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
STAG1Q8WVM7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.77■□□□□ 0.92
STAG1Q8WVM7 AL662844.1-201ENST00000546340 181 ntBASIC20.77■□□□□ 0.92
STAG1Q8WVM7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.77■□□□□ 0.92
STAG1Q8WVM7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.77■□□□□ 0.92
STAG1Q8WVM7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.77■□□□□ 0.92
STAG1Q8WVM7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.77■□□□□ 0.92
STAG1Q8WVM7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.77■□□□□ 0.92
STAG1Q8WVM7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.77■□□□□ 0.92
STAG1Q8WVM7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
STAG1Q8WVM7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
STAG1Q8WVM7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
STAG1Q8WVM7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
STAG1Q8WVM7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.77■□□□□ 0.91
STAG1Q8WVM7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.77■□□□□ 0.91
STAG1Q8WVM7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
STAG1Q8WVM7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
STAG1Q8WVM7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.76■□□□□ 0.91
STAG1Q8WVM7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 AC079776.2-201ENST00000641154 1609 ntBASIC20.76■□□□□ 0.91
STAG1Q8WVM7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 SPDYE21P-201ENST00000413323 827 ntBASIC20.76■□□□□ 0.91
STAG1Q8WVM7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 TP73-AS1-207ENST00000624167 988 ntBASIC20.76■□□□□ 0.91
STAG1Q8WVM7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 SIGLEC16-201ENST00000599858 1437 ntBASIC20.76■□□□□ 0.91
STAG1Q8WVM7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
STAG1Q8WVM7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 AC020763.4-201ENST00000623414 4170 ntBASIC20.75■□□□□ 0.91
STAG1Q8WVM7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 AC003669.1-201ENST00000334569 611 ntBASIC20.75■□□□□ 0.91
STAG1Q8WVM7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.75■□□□□ 0.91
STAG1Q8WVM7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms