Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 BX276092.7-203ENST00000637198 1536 ntBASIC20.75■□□□□ 0.91
TRPM4Q8TD43 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 FAM58DP-201ENST00000428076 619 ntBASIC20.75■□□□□ 0.91
TRPM4Q8TD43 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 CNN2P2-201ENST00000443536 909 ntBASIC20.75■□□□□ 0.91
TRPM4Q8TD43 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 CNN2P3-201ENST00000450201 906 ntBASIC20.75■□□□□ 0.91
TRPM4Q8TD43 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.75■□□□□ 0.91
TRPM4Q8TD43 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 AL136317.3-201ENST00000618497 906 ntBASIC20.75■□□□□ 0.91
TRPM4Q8TD43 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.75■□□□□ 0.91
TRPM4Q8TD43 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.74■□□□□ 0.91
TRPM4Q8TD43 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 AL096828.2-201ENST00000567259 1965 ntBASIC20.74■□□□□ 0.91
TRPM4Q8TD43 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 AC002056.1-201ENST00000395613 760 ntBASIC20.74■□□□□ 0.91
TRPM4Q8TD43 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 AL671277.1-201ENST00000429656 993 ntBASIC20.74■□□□□ 0.91
TRPM4Q8TD43 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 TSPY16P-201ENST00000449843 468 ntBASIC20.74■□□□□ 0.91
TRPM4Q8TD43 TERF1P3-201ENST00000505638 1227 ntBASIC20.74■□□□□ 0.91
TRPM4Q8TD43 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.74■□□□□ 0.91
TRPM4Q8TD43 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRPM4Q8TD43 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 AL031598.1-201ENST00000561511 1773 ntBASIC20.73■□□□□ 0.91
TRPM4Q8TD43 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 GK-202ENST00000378941 458 ntTSL 3 BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 BASP1P1-201ENST00000430708 665 ntBASIC20.73■□□□□ 0.91
TRPM4Q8TD43 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRPM4Q8TD43 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRPM4Q8TD43 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TRPM4Q8TD43 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRPM4Q8TD43 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRPM4Q8TD43 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRPM4Q8TD43 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRPM4Q8TD43 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRPM4Q8TD43 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRPM4Q8TD43 MIR943-201ENST00000401286 94 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms