Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 AL591424.1-201ENST00000442569 1213 ntBASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 AC145285.3-201ENST00000564603 959 ntBASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 AL049840.3-201ENST00000602669 611 ntBASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.87■□□□□ 0.93
NKX2-3Q8TAU0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 LINC00304-203ENST00000565008 1864 ntBASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 RPSAP43-201ENST00000402237 625 ntBASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 DNAJB3-201ENST00000446806 729 ntBASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 AC116407.3-201ENST00000623905 1129 ntBASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-3Q8TAU0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-3Q8TAU0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 GPX1P2-201ENST00000429271 606 ntBASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 SLC25A6P5-201ENST00000435663 894 ntBASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 AC010327.4-202ENST00000591484 748 ntBASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 AD001527.2-201ENST00000622994 785 ntBASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.84■□□□□ 0.93
NKX2-3Q8TAU0 PCDHB18P-201ENST00000524813 2368 ntBASIC20.83■□□□□ 0.93
NKX2-3Q8TAU0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms