Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RTL9Q8NET4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RTL9Q8NET4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTL9Q8NET4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTL9Q8NET4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.66■■□□□ 1.06
RTL9Q8NET4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.66■■□□□ 1.06
RTL9Q8NET4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.66■■□□□ 1.06
RTL9Q8NET4 AC002347.1-201ENST00000569543 541 ntBASIC21.66■■□□□ 1.06
RTL9Q8NET4 MIR3687-2-201ENST00000577708 61 ntBASIC21.66■■□□□ 1.06
RTL9Q8NET4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.66■■□□□ 1.06
RTL9Q8NET4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.66■■□□□ 1.06
RTL9Q8NET4 MIR3687-1-201ENST00000614492 61 ntBASIC21.66■■□□□ 1.06
RTL9Q8NET4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.66■■□□□ 1.06
RTL9Q8NET4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RTL9Q8NET4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTL9Q8NET4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTL9Q8NET4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTL9Q8NET4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTL9Q8NET4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RTL9Q8NET4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTL9Q8NET4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RTL9Q8NET4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTL9Q8NET4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RTL9Q8NET4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTL9Q8NET4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.65■■□□□ 1.06
RTL9Q8NET4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
RTL9Q8NET4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTL9Q8NET4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTL9Q8NET4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTL9Q8NET4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTL9Q8NET4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.65■■□□□ 1.06
RTL9Q8NET4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.65■■□□□ 1.06
RTL9Q8NET4 PRSS29P-201ENST00000440800 595 ntBASIC21.65■■□□□ 1.06
RTL9Q8NET4 DNAJB3-202ENST00000449667 1266 ntBASIC21.65■■□□□ 1.06
RTL9Q8NET4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.65■■□□□ 1.06
RTL9Q8NET4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC21.65■■□□□ 1.06
RTL9Q8NET4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.65■■□□□ 1.06
RTL9Q8NET4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
RTL9Q8NET4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.65■■□□□ 1.06
RTL9Q8NET4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RTL9Q8NET4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.65■■□□□ 1.06
RTL9Q8NET4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.65■■□□□ 1.06
RTL9Q8NET4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTL9Q8NET4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.65■■□□□ 1.06
RTL9Q8NET4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.65■■□□□ 1.06
RTL9Q8NET4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTL9Q8NET4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RTL9Q8NET4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
RTL9Q8NET4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RTL9Q8NET4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
RTL9Q8NET4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RTL9Q8NET4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RTL9Q8NET4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.64■■□□□ 1.06
RTL9Q8NET4 ACTG1P4-201ENST00000425123 1122 ntBASIC21.64■■□□□ 1.06
RTL9Q8NET4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.64■■□□□ 1.06
RTL9Q8NET4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RTL9Q8NET4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.64■■□□□ 1.06
RTL9Q8NET4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.64■■□□□ 1.06
RTL9Q8NET4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RTL9Q8NET4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.64■■□□□ 1.05
RTL9Q8NET4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTL9Q8NET4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTL9Q8NET4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.05
RTL9Q8NET4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTL9Q8NET4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.64■■□□□ 1.05
RTL9Q8NET4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.64■■□□□ 1.05
RTL9Q8NET4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTL9Q8NET4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
RTL9Q8NET4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.63■■□□□ 1.05
RTL9Q8NET4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTL9Q8NET4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTL9Q8NET4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTL9Q8NET4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RTL9Q8NET4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RTL9Q8NET4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTL9Q8NET4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
RTL9Q8NET4 AP002414.1-201ENST00000391405 1147 ntBASIC21.63■■□□□ 1.05
RTL9Q8NET4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.63■■□□□ 1.05
RTL9Q8NET4 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.63■■□□□ 1.05
RTL9Q8NET4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC21.63■■□□□ 1.05
RTL9Q8NET4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.63■■□□□ 1.05
RTL9Q8NET4 KRT18P2-201ENST00000447938 1258 ntBASIC21.63■■□□□ 1.05
RTL9Q8NET4 HCG4B-203ENST00000450128 991 ntBASIC21.63■■□□□ 1.05
RTL9Q8NET4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.63■■□□□ 1.05
RTL9Q8NET4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.63■■□□□ 1.05
RTL9Q8NET4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.63■■□□□ 1.05
RTL9Q8NET4 AC138028.4-201ENST00000564984 1845 ntBASIC21.63■■□□□ 1.05
RTL9Q8NET4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.63■■□□□ 1.05
RTL9Q8NET4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTL9Q8NET4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTL9Q8NET4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RTL9Q8NET4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.63■■□□□ 1.05
RTL9Q8NET4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTL9Q8NET4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTL9Q8NET4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.63■■□□□ 1.05
RTL9Q8NET4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTL9Q8NET4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTL9Q8NET4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.62■■□□□ 1.05
RTL9Q8NET4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RTL9Q8NET4 LINC00982-205ENST00000420957 435 ntBASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms