Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 AC116407.2-201ENST00000613639 860 ntBASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDH20Q8N6Y1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 FAM220CP-201ENST00000395253 831 ntBASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 AC007967.3-201ENST00000434308 558 ntBASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 EMBP1-201ENST00000458200 901 ntBASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 REXO1L6P-202ENST00000619970 1078 ntBASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH20Q8N6Y1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 SAPCD2P3-201ENST00000455031 850 ntBASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms