Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK3Q8IV63 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VRK3Q8IV63 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK3Q8IV63 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK3Q8IV63 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VRK3Q8IV63 LETM1P2-201ENST00000597330 2178 ntBASIC17.26■□□□□ 0.35
VRK3Q8IV63 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK3Q8IV63 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VRK3Q8IV63 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.26■□□□□ 0.35
VRK3Q8IV63 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VRK3Q8IV63 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VRK3Q8IV63 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VRK3Q8IV63 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK3Q8IV63 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK3Q8IV63 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VRK3Q8IV63 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK3Q8IV63 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK3Q8IV63 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK3Q8IV63 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VRK3Q8IV63 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VRK3Q8IV63 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK3Q8IV63 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK3Q8IV63 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK3Q8IV63 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VRK3Q8IV63 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK3Q8IV63 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VRK3Q8IV63 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VRK3Q8IV63 KRT8P10-201ENST00000450021 1447 ntBASIC17.25■□□□□ 0.35
VRK3Q8IV63 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VRK3Q8IV63 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VRK3Q8IV63 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.25■□□□□ 0.35
VRK3Q8IV63 NUS1P1-201ENST00000446295 882 ntBASIC17.25■□□□□ 0.35
VRK3Q8IV63 MIR5100-201ENST00000579544 119 ntBASIC17.25■□□□□ 0.35
VRK3Q8IV63 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.25■□□□□ 0.35
VRK3Q8IV63 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.25■□□□□ 0.35
VRK3Q8IV63 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK3Q8IV63 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK3Q8IV63 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.25■□□□□ 0.35
VRK3Q8IV63 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.25■□□□□ 0.35
VRK3Q8IV63 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VRK3Q8IV63 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK3Q8IV63 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.25■□□□□ 0.35
VRK3Q8IV63 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK3Q8IV63 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.25■□□□□ 0.35
VRK3Q8IV63 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VRK3Q8IV63 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK3Q8IV63 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK3Q8IV63 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK3Q8IV63 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK3Q8IV63 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
VRK3Q8IV63 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK3Q8IV63 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
VRK3Q8IV63 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK3Q8IV63 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
VRK3Q8IV63 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.24■□□□□ 0.35
VRK3Q8IV63 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK3Q8IV63 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK3Q8IV63 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK3Q8IV63 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VRK3Q8IV63 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.24■□□□□ 0.35
VRK3Q8IV63 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.24■□□□□ 0.35
VRK3Q8IV63 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.24■□□□□ 0.35
VRK3Q8IV63 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.24■□□□□ 0.35
VRK3Q8IV63 AL732292.2-201ENST00000609649 430 ntBASIC17.24■□□□□ 0.35
VRK3Q8IV63 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.24■□□□□ 0.35
VRK3Q8IV63 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.24■□□□□ 0.35
VRK3Q8IV63 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK3Q8IV63 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VRK3Q8IV63 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VRK3Q8IV63 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK3Q8IV63 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
VRK3Q8IV63 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK3Q8IV63 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
VRK3Q8IV63 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.24■□□□□ 0.35
VRK3Q8IV63 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VRK3Q8IV63 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK3Q8IV63 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VRK3Q8IV63 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VRK3Q8IV63 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.23■□□□□ 0.35
VRK3Q8IV63 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VRK3Q8IV63 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.23■□□□□ 0.35
VRK3Q8IV63 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
VRK3Q8IV63 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VRK3Q8IV63 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.23■□□□□ 0.35
VRK3Q8IV63 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.23■□□□□ 0.35
VRK3Q8IV63 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VRK3Q8IV63 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VRK3Q8IV63 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
VRK3Q8IV63 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.23■□□□□ 0.35
VRK3Q8IV63 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VRK3Q8IV63 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
VRK3Q8IV63 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.23■□□□□ 0.35
VRK3Q8IV63 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VRK3Q8IV63 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.23■□□□□ 0.35
VRK3Q8IV63 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.23■□□□□ 0.35
VRK3Q8IV63 PRELID1P1-202ENST00000567272 903 ntBASIC17.23■□□□□ 0.35
VRK3Q8IV63 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.23■□□□□ 0.35
VRK3Q8IV63 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VRK3Q8IV63 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VRK3Q8IV63 AC139713.2-201ENST00000641328 2723 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms