Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 AL096828.2-201ENST00000567259 1965 ntBASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 AC015922.1-201ENST00000421102 1152 ntBASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 AC007967.3-201ENST00000434308 558 ntBASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 PDPK2P-202ENST00000562415 1191 ntBASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 AL589182.2-201ENST00000619332 1049 ntBASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 AC004706.3-202ENST00000621574 984 ntBASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 SIGLEC16-201ENST00000599858 1437 ntBASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 AC006504.4-201ENST00000592118 1568 ntBASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 AC069262.1-201ENST00000539058 672 ntBASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
OTOP1Q7RTM1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 ACTG1P14-201ENST00000446382 1122 ntBASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 AC004835.2-201ENST00000603762 682 ntBASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
OTOP1Q7RTM1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
OTOP1Q7RTM1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.33■□□□□ 0.85
OTOP1Q7RTM1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms