Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC22.23■■□□□ 1.15
COPS6Q7L5N1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COPS6Q7L5N1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC22.23■■□□□ 1.15
COPS6Q7L5N1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC22.23■■□□□ 1.15
COPS6Q7L5N1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COPS6Q7L5N1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COPS6Q7L5N1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COPS6Q7L5N1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COPS6Q7L5N1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COPS6Q7L5N1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC22.23■■□□□ 1.15
COPS6Q7L5N1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COPS6Q7L5N1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
COPS6Q7L5N1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 AC097637.2-201ENST00000624096 1997 ntBASIC22.22■■□□□ 1.15
COPS6Q7L5N1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 HS6ST1P1-201ENST00000481504 1234 ntBASIC22.22■■□□□ 1.15
COPS6Q7L5N1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
COPS6Q7L5N1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC22.21■■□□□ 1.15
COPS6Q7L5N1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
COPS6Q7L5N1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.2■■□□□ 1.14
COPS6Q7L5N1 KRT18P2-201ENST00000447938 1258 ntBASIC22.2■■□□□ 1.14
COPS6Q7L5N1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC22.2■■□□□ 1.14
COPS6Q7L5N1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC22.19■■□□□ 1.14
COPS6Q7L5N1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms