Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 HLA-J-201ENST00000462773 1622 ntBASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCHD4Q6ZW05 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 AC022898.2-201ENST00000616822 1312 ntBASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 EGLN1P1-201ENST00000531623 762 ntBASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 MIR4497-201ENST00000583208 89 ntBASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 AC010947.1-201ENST00000623454 693 ntBASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PTCHD4Q6ZW05 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 MIR3180-4-201ENST00000582223 153 ntBASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 AC010240.3-201ENST00000607688 395 ntBASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.27■□□□□ 0.2
PTCHD4Q6ZW05 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.27■□□□□ 0.19
PTCHD4Q6ZW05 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTCHD4Q6ZW05 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PTCHD4Q6ZW05 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.27■□□□□ 0.19
PTCHD4Q6ZW05 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PTCHD4Q6ZW05 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTCHD4Q6ZW05 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTCHD4Q6ZW05 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTCHD4Q6ZW05 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PTCHD4Q6ZW05 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
PTCHD4Q6ZW05 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTCHD4Q6ZW05 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms