Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 AL355472.2-201ENST00000422958 438 ntBASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 TUBB8P6-201ENST00000436895 1288 ntBASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 AC133552.2-202ENST00000575694 574 ntBASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 AC092850.2-201ENST00000623821 2697 ntBASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 AL513523.2-202ENST00000427283 2040 ntBASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
KCNIP4Q6PIL6 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 AL121832.2-201ENST00000610979 668 ntBASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 IKBKGP1-201ENST00000612193 1073 ntBASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.71□□□□□ -0.21
KCNIP4Q6PIL6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms