Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 KRT18P23-201ENST00000435622 1283 ntBASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM53Q6P2H8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 AC009947.2-201ENST00000444014 672 ntBASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 KRT18P41-201ENST00000518924 1277 ntBASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 AC012306.2-201ENST00000609350 630 ntBASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM53Q6P2H8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 AC113347.1-201ENST00000413321 391 ntBASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 ECEL1P3-201ENST00000427961 737 ntBASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 AC112497.1-201ENST00000624824 639 ntBASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM53Q6P2H8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms