Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 AL138831.2-201ENST00000606564 490 ntBASIC18.33■□□□□ 0.52
LRRC38Q5VT99 AC019129.2-201ENST00000609837 1235 ntBASIC18.33■□□□□ 0.52
LRRC38Q5VT99 AL592071.1-201ENST00000611956 408 ntBASIC18.33■□□□□ 0.52
LRRC38Q5VT99 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 FZD10-202ENST00000539839 3282 ntBASIC18.33■□□□□ 0.52
LRRC38Q5VT99 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.33■□□□□ 0.52
LRRC38Q5VT99 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 TMPOP1-202ENST00000424642 1267 ntBASIC18.32■□□□□ 0.52
LRRC38Q5VT99 AL845331.1-201ENST00000424978 1190 ntBASIC18.32■□□□□ 0.52
LRRC38Q5VT99 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC38Q5VT99 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 KRT8P26-201ENST00000534154 1276 ntBASIC18.31■□□□□ 0.52
LRRC38Q5VT99 AC124864.1-201ENST00000623408 392 ntBASIC18.31■□□□□ 0.52
LRRC38Q5VT99 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 AD000864.1-201ENST00000624076 2295 ntBASIC18.31■□□□□ 0.52
LRRC38Q5VT99 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.31■□□□□ 0.52
LRRC38Q5VT99 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 AC009053.2-201ENST00000563701 2365 ntBASIC18.3■□□□□ 0.52
LRRC38Q5VT99 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC38Q5VT99 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms