Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 AL355355.2-201ENST00000442321 338 ntBASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 AP001412.1-201ENST00000608405 714 ntBASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00242Q5T6M2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 SEC1P-202ENST00000473944 940 ntBASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 AC113410.3-201ENST00000623366 203 ntBASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00242Q5T6M2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
LINC00242Q5T6M2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
LINC00242Q5T6M2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
LINC00242Q5T6M2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.08□□□□□ -0.47
LINC00242Q5T6M2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
LINC00242Q5T6M2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms