Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.51■□□□□ 0.07
CHRFAM7AQ494W8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CHRFAM7AQ494W8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CHRFAM7AQ494W8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHRFAM7AQ494W8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.51■□□□□ 0.07
CHRFAM7AQ494W8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CHRFAM7AQ494W8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRFAM7AQ494W8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHRFAM7AQ494W8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 AC012317.2-201ENST00000623305 2251 ntBASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 AC009078.2-202ENST00000463353 338 ntBASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 MIR3180-1-201ENST00000580374 94 ntBASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 MIR3180-3-201ENST00000584616 94 ntBASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.5■□□□□ 0.07
CHRFAM7AQ494W8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 GMCL1P1-201ENST00000463439 1581 ntBASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 AC092597.1-201ENST00000487352 616 ntBASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 AL160237.2-201ENST00000556165 472 ntBASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 AC091304.2-201ENST00000564639 760 ntBASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRFAM7AQ494W8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.48■□□□□ 0.07
CHRFAM7AQ494W8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms