Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 AC005915.1-201ENST00000624912 2018 ntBASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 AL391005.1-201ENST00000623953 2435 ntBASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 AC022898.2-201ENST00000616822 1312 ntBASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 OR6D1P-203ENST00000641209 4860 ntBASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 AC009949.1-201ENST00000623048 1830 ntBASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 KRT8P7-201ENST00000533003 1432 ntBASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 AC096733.2-201ENST00000609937 1394 ntBASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.69□□□□□ -0.06
ANKRD55Q3KP44 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 RPS2P55-201ENST00000397318 883 ntBASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 MESTP1-201ENST00000404287 994 ntBASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 AC107956.1-201ENST00000494359 873 ntBASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 AC009065.1-201ENST00000564055 1225 ntBASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.68□□□□□ -0.06
ANKRD55Q3KP44 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms