Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 AC006557.2-201ENST00000592985 1240 ntBASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 AC002310.6-201ENST00000624451 1377 ntBASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTC1Q2NKJ3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 PRYP5-201ENST00000451909 266 ntBASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 BX005266.1-201ENST00000473402 457 ntBASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
CTC1Q2NKJ3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 AC112698.1-201ENST00000510299 916 ntBASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 C20orf181-201ENST00000623918 480 ntBASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 PMPCAP1-201ENST00000508114 1576 ntBASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CTC1Q2NKJ3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 AC097374.2-201ENST00000618617 1306 ntBASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 CNN2P11-201ENST00000429351 262 ntBASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 AC136632.2-201ENST00000512891 861 ntBASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 AP002472.1-201ENST00000577490 586 ntBASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms