Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 MIR4751-201ENST00000578027 74 ntBASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHROOM1Q2M3G4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 AC002347.1-201ENST00000569543 541 ntBASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 AP001160.2-201ENST00000596071 487 ntBASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHROOM1Q2M3G4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SHROOM1Q2M3G4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.52■□□□□ 0.87
SHROOM1Q2M3G4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
SHROOM1Q2M3G4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SHROOM1Q2M3G4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SHROOM1Q2M3G4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.52■□□□□ 0.87
SHROOM1Q2M3G4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
SHROOM1Q2M3G4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 PTCHD3P3-201ENST00000403073 906 ntBASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 OR7E47P-204ENST00000575924 449 ntBASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 AC008667.4-201ENST00000607370 168 ntBASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 PGM5P2-202ENST00000637225 1043 ntBASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.51■□□□□ 0.87
SHROOM1Q2M3G4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 KRT18P55-202ENST00000578578 1546 ntBASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 LINC00982-205ENST00000420957 435 ntBASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 VN2R19P-201ENST00000442399 1052 ntBASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHROOM1Q2M3G4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms