Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AC124864.1-201ENST00000623408 392 ntBASIC17.86■□□□□ 0.45
CDH17Q12864 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH17Q12864 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH17Q12864 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CDH17Q12864 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH17Q12864 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH17Q12864 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH17Q12864 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH17Q12864 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH17Q12864 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDH17Q12864 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH17Q12864 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH17Q12864 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH17Q12864 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH17Q12864 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CDH17Q12864 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH17Q12864 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CDH17Q12864 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH17Q12864 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH17Q12864 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH17Q12864 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CDH17Q12864 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CDH17Q12864 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.85■□□□□ 0.45
CDH17Q12864 KRT8P26-201ENST00000534154 1276 ntBASIC17.85■□□□□ 0.45
CDH17Q12864 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH17Q12864 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.85■□□□□ 0.45
CDH17Q12864 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH17Q12864 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH17Q12864 IGHV3-41-201ENST00000613121 348 ntBASIC17.85■□□□□ 0.45
CDH17Q12864 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH17Q12864 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CDH17Q12864 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH17Q12864 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH17Q12864 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH17Q12864 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH17Q12864 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH17Q12864 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH17Q12864 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.84■□□□□ 0.45
CDH17Q12864 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH17Q12864 AC010460.3-201ENST00000511359 1579 ntBASIC17.84■□□□□ 0.45
CDH17Q12864 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH17Q12864 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH17Q12864 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH17Q12864 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH17Q12864 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH17Q12864 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH17Q12864 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH17Q12864 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH17Q12864 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH17Q12864 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
CDH17Q12864 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH17Q12864 AL353801.3-201ENST00000609898 542 ntBASIC17.84■□□□□ 0.45
CDH17Q12864 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.84■□□□□ 0.45
CDH17Q12864 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH17Q12864 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH17Q12864 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH17Q12864 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH17Q12864 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH17Q12864 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH17Q12864 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH17Q12864 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH17Q12864 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CDH17Q12864 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH17Q12864 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.83■□□□□ 0.45
CDH17Q12864 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.83■□□□□ 0.45
CDH17Q12864 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH17Q12864 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDH17Q12864 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH17Q12864 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH17Q12864 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDH17Q12864 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDH17Q12864 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
CDH17Q12864 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH17Q12864 COX5BP2-201ENST00000392354 334 ntBASIC17.83■□□□□ 0.44
CDH17Q12864 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH17Q12864 FAM210CP-201ENST00000445714 574 ntBASIC17.83■□□□□ 0.44
CDH17Q12864 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.83■□□□□ 0.44
CDH17Q12864 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.83■□□□□ 0.44
CDH17Q12864 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH17Q12864 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms