Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GCNT1Q02742 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.86■□□□□ 0.61
GCNT1Q02742 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.86■□□□□ 0.61
GCNT1Q02742 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GCNT1Q02742 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GCNT1Q02742 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
GCNT1Q02742 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GCNT1Q02742 AL023806.1-201ENST00000603994 1649 ntBASIC18.86■□□□□ 0.61
GCNT1Q02742 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GCNT1Q02742 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.86■□□□□ 0.61
GCNT1Q02742 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GCNT1Q02742 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GCNT1Q02742 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GCNT1Q02742 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GCNT1Q02742 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GCNT1Q02742 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
GCNT1Q02742 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GCNT1Q02742 MINOS1P3-201ENST00000457048 203 ntBASIC18.86■□□□□ 0.61
GCNT1Q02742 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GCNT1Q02742 IGHV3-52-201ENST00000519770 353 ntBASIC18.86■□□□□ 0.61
GCNT1Q02742 AC012615.1-201ENST00000565797 1299 ntBASIC18.86■□□□□ 0.61
GCNT1Q02742 AC092329.2-201ENST00000598402 547 ntBASIC18.86■□□□□ 0.61
GCNT1Q02742 AC092119.3-201ENST00000612618 583 ntBASIC18.86■□□□□ 0.61
GCNT1Q02742 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.86■□□□□ 0.61
GCNT1Q02742 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GCNT1Q02742 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
GCNT1Q02742 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
GCNT1Q02742 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GCNT1Q02742 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.86■□□□□ 0.61
GCNT1Q02742 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
GCNT1Q02742 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
GCNT1Q02742 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
GCNT1Q02742 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GCNT1Q02742 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GCNT1Q02742 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.85■□□□□ 0.61
GCNT1Q02742 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.85■□□□□ 0.61
GCNT1Q02742 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GCNT1Q02742 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
GCNT1Q02742 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.85■□□□□ 0.61
GCNT1Q02742 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
GCNT1Q02742 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GCNT1Q02742 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GCNT1Q02742 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GCNT1Q02742 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GCNT1Q02742 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GCNT1Q02742 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.85■□□□□ 0.61
GCNT1Q02742 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GCNT1Q02742 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GCNT1Q02742 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
GCNT1Q02742 AC074051.2-201ENST00000565115 352 ntBASIC18.85■□□□□ 0.61
GCNT1Q02742 AC109462.3-201ENST00000573934 613 ntBASIC18.85■□□□□ 0.61
GCNT1Q02742 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.85■□□□□ 0.61
GCNT1Q02742 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.85■□□□□ 0.61
GCNT1Q02742 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.85■□□□□ 0.61
GCNT1Q02742 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GCNT1Q02742 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GCNT1Q02742 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GCNT1Q02742 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
GCNT1Q02742 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.84■□□□□ 0.61
GCNT1Q02742 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.84■□□□□ 0.61
GCNT1Q02742 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GCNT1Q02742 AL353593.2-201ENST00000602529 1483 ntBASIC18.84■□□□□ 0.61
GCNT1Q02742 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.84■□□□□ 0.61
GCNT1Q02742 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.84■□□□□ 0.61
GCNT1Q02742 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.84■□□□□ 0.61
GCNT1Q02742 INTS4P1-201ENST00000438455 1935 ntBASIC18.84■□□□□ 0.61
GCNT1Q02742 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.84■□□□□ 0.61
GCNT1Q02742 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.84■□□□□ 0.61
GCNT1Q02742 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
GCNT1Q02742 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GCNT1Q02742 AC108860.2-201ENST00000562760 2183 ntBASIC18.84■□□□□ 0.61
GCNT1Q02742 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GCNT1Q02742 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GCNT1Q02742 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GCNT1Q02742 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GCNT1Q02742 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
GCNT1Q02742 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GCNT1Q02742 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GCNT1Q02742 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.84■□□□□ 0.61
GCNT1Q02742 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.84■□□□□ 0.61
GCNT1Q02742 AC104819.1-201ENST00000504587 486 ntBASIC18.84■□□□□ 0.61
GCNT1Q02742 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.84■□□□□ 0.61
GCNT1Q02742 AP000867.3-201ENST00000524675 377 ntBASIC18.84■□□□□ 0.61
GCNT1Q02742 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GCNT1Q02742 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.84■□□□□ 0.61
GCNT1Q02742 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.84■□□□□ 0.61
GCNT1Q02742 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
GCNT1Q02742 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.84■□□□□ 0.61
GCNT1Q02742 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GCNT1Q02742 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
GCNT1Q02742 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.84■□□□□ 0.61
GCNT1Q02742 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GCNT1Q02742 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GCNT1Q02742 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GCNT1Q02742 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GCNT1Q02742 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
GCNT1Q02742 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GCNT1Q02742 AC016396.2-201ENST00000562575 1417 ntBASIC18.83■□□□□ 0.61
GCNT1Q02742 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GCNT1Q02742 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms