Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA3P83110 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.27■□□□□ 0.84
HTRA3P83110 TMEM14DP-201ENST00000422205 345 ntBASIC20.27■□□□□ 0.84
HTRA3P83110 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA3P83110 AC011495.1-201ENST00000498085 584 ntBASIC20.27■□□□□ 0.84
HTRA3P83110 STK19B-204ENST00000512515 211 ntBASIC20.27■□□□□ 0.84
HTRA3P83110 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.27■□□□□ 0.84
HTRA3P83110 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA3P83110 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.27■□□□□ 0.84
HTRA3P83110 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HTRA3P83110 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA3P83110 AC018445.3-201ENST00000624177 1945 ntBASIC20.27■□□□□ 0.84
HTRA3P83110 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HTRA3P83110 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.27■□□□□ 0.83
HTRA3P83110 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HTRA3P83110 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.27■□□□□ 0.83
HTRA3P83110 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
HTRA3P83110 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.27■□□□□ 0.83
HTRA3P83110 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.27■□□□□ 0.83
HTRA3P83110 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.27■□□□□ 0.83
HTRA3P83110 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HTRA3P83110 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HTRA3P83110 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
HTRA3P83110 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 MYCLP1-201ENST00000372451 1075 ntBASIC20.26■□□□□ 0.83
HTRA3P83110 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HTRA3P83110 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 MIR1908-201ENST00000410394 80 ntBASIC20.26■□□□□ 0.83
HTRA3P83110 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HTRA3P83110 SLC25A6P2-201ENST00000497974 877 ntBASIC20.26■□□□□ 0.83
HTRA3P83110 AC109462.3-201ENST00000573934 613 ntBASIC20.26■□□□□ 0.83
HTRA3P83110 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HTRA3P83110 CHCHD2P3-201ENST00000603038 451 ntBASIC20.26■□□□□ 0.83
HTRA3P83110 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.26■□□□□ 0.83
HTRA3P83110 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTRA3P83110 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.26■□□□□ 0.83
HTRA3P83110 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.26■□□□□ 0.83
HTRA3P83110 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.26■□□□□ 0.83
HTRA3P83110 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTRA3P83110 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTRA3P83110 AC012676.1-201ENST00000574705 1949 ntBASIC20.25■□□□□ 0.83
HTRA3P83110 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HTRA3P83110 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.25■□□□□ 0.83
HTRA3P83110 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
HTRA3P83110 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.25■□□□□ 0.83
HTRA3P83110 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.25■□□□□ 0.83
HTRA3P83110 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTRA3P83110 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTRA3P83110 AC093677.2-201ENST00000600169 1863 ntBASIC20.25■□□□□ 0.83
HTRA3P83110 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTRA3P83110 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTRA3P83110 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
HTRA3P83110 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HTRA3P83110 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC20.25■□□□□ 0.83
HTRA3P83110 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.25■□□□□ 0.83
HTRA3P83110 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTRA3P83110 AC009477.1-201ENST00000452936 217 ntBASIC20.25■□□□□ 0.83
HTRA3P83110 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HTRA3P83110 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC20.25■□□□□ 0.83
HTRA3P83110 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.25■□□□□ 0.83
HTRA3P83110 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC20.25■□□□□ 0.83
HTRA3P83110 RHOQP1-201ENST00000555758 579 ntBASIC20.25■□□□□ 0.83
HTRA3P83110 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.25■□□□□ 0.83
HTRA3P83110 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HTRA3P83110 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC20.25■□□□□ 0.83
HTRA3P83110 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTRA3P83110 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTRA3P83110 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.25■□□□□ 0.83
HTRA3P83110 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTRA3P83110 AL590787.1-201ENST00000568856 1315 ntBASIC20.25■□□□□ 0.83
HTRA3P83110 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTRA3P83110 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTRA3P83110 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.24■□□□□ 0.83
HTRA3P83110 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.24■□□□□ 0.83
HTRA3P83110 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTRA3P83110 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTRA3P83110 GOLGA2P4-201ENST00000441462 777 ntBASIC20.24■□□□□ 0.83
HTRA3P83110 RN7SL837P-201ENST00000463010 287 ntBASIC20.24■□□□□ 0.83
HTRA3P83110 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.24■□□□□ 0.83
HTRA3P83110 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HTRA3P83110 AP005482.1-201ENST00000563722 1273 ntBASIC20.24■□□□□ 0.83
HTRA3P83110 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTRA3P83110 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HTRA3P83110 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms