Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
RPS3AP61247 AL121956.5-201ENST00000625261 221 ntBASIC16.62■□□□□ 0.25
RPS3AP61247 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 PP12613-201ENST00000424958 2230 ntBASIC16.62■□□□□ 0.25
RPS3AP61247 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.62■□□□□ 0.25
RPS3AP61247 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.62■□□□□ 0.25
RPS3AP61247 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.62■□□□□ 0.25
RPS3AP61247 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS3AP61247 AC112777.1-201ENST00000540175 1423 ntBASIC16.62■□□□□ 0.25
RPS3AP61247 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.61■□□□□ 0.25
RPS3AP61247 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RPS3AP61247 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.61■□□□□ 0.25
RPS3AP61247 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.61■□□□□ 0.25
RPS3AP61247 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RPS3AP61247 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RPS3AP61247 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 SPDYE15P-201ENST00000424157 909 ntBASIC16.61■□□□□ 0.25
RPS3AP61247 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 KRT18P38-201ENST00000449496 1282 ntBASIC16.61■□□□□ 0.25
RPS3AP61247 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.61■□□□□ 0.25
RPS3AP61247 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.61■□□□□ 0.25
RPS3AP61247 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.61■□□□□ 0.25
RPS3AP61247 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RPS3AP61247 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.61■□□□□ 0.25
RPS3AP61247 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.61■□□□□ 0.25
RPS3AP61247 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RPS3AP61247 LINC01311-201ENST00000565162 1445 ntBASIC16.61■□□□□ 0.25
RPS3AP61247 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RPS3AP61247 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
RPS3AP61247 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS3AP61247 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RPS3AP61247 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.6■□□□□ 0.25
RPS3AP61247 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS3AP61247 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RPS3AP61247 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
RPS3AP61247 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS3AP61247 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.6■□□□□ 0.25
RPS3AP61247 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPS3AP61247 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS3AP61247 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS3AP61247 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS3AP61247 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RPS3AP61247 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPS3AP61247 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RPS3AP61247 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
RPS3AP61247 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPS3AP61247 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.6■□□□□ 0.25
RPS3AP61247 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS3AP61247 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPS3AP61247 AL031133.1-201ENST00000406807 723 ntBASIC16.6■□□□□ 0.25
RPS3AP61247 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.6■□□□□ 0.25
RPS3AP61247 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS3AP61247 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.6■□□□□ 0.25
RPS3AP61247 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.6■□□□□ 0.25
RPS3AP61247 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.6■□□□□ 0.25
RPS3AP61247 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
RPS3AP61247 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.6■□□□□ 0.25
RPS3AP61247 AL157888.1-201ENST00000631930 593 ntBASIC16.6■□□□□ 0.25
RPS3AP61247 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RPS3AP61247 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.6■□□□□ 0.25
RPS3AP61247 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS3AP61247 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.6■□□□□ 0.25
RPS3AP61247 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.6■□□□□ 0.25
RPS3AP61247 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.6■□□□□ 0.25
RPS3AP61247 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS3AP61247 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RPS3AP61247 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPS3AP61247 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS3AP61247 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.6■□□□□ 0.25
RPS3AP61247 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS3AP61247 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RPS3AP61247 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RPS3AP61247 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS3AP61247 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms