Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.61■□□□□ 0.25
RAB38P57729 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB38P57729 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RAB38P57729 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
RAB38P57729 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RAB38P57729 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RAB38P57729 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB38P57729 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RAB38P57729 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB38P57729 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RAB38P57729 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB38P57729 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB38P57729 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB38P57729 AL049757.1-201ENST00000616842 1596 ntBASIC16.6■□□□□ 0.25
RAB38P57729 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RAB38P57729 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.6■□□□□ 0.25
RAB38P57729 MYCLP1-201ENST00000372451 1075 ntBASIC16.6■□□□□ 0.25
RAB38P57729 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
RAB38P57729 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB38P57729 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB38P57729 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.6■□□□□ 0.25
RAB38P57729 IFNL4P1-201ENST00000607083 540 ntBASIC16.6■□□□□ 0.25
RAB38P57729 AD001527.2-201ENST00000622994 785 ntBASIC16.6■□□□□ 0.25
RAB38P57729 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
RAB38P57729 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 AL353593.2-201ENST00000602529 1483 ntBASIC16.6■□□□□ 0.25
RAB38P57729 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB38P57729 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RAB38P57729 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB38P57729 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
RAB38P57729 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB38P57729 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB38P57729 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB38P57729 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB38P57729 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RAB38P57729 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB38P57729 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB38P57729 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
RAB38P57729 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB38P57729 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB38P57729 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RAB38P57729 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB38P57729 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB38P57729 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.59■□□□□ 0.25
RAB38P57729 ABCD1P5-201ENST00000445663 754 ntBASIC16.59■□□□□ 0.25
RAB38P57729 AC132008.2-207ENST00000454517 770 ntBASIC16.59■□□□□ 0.25
RAB38P57729 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.59■□□□□ 0.25
RAB38P57729 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.59■□□□□ 0.25
RAB38P57729 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RAB38P57729 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.59■□□□□ 0.25
RAB38P57729 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAB38P57729 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
RAB38P57729 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAB38P57729 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB38P57729 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB38P57729 AC067852.2-201ENST00000590513 2313 ntBASIC16.59■□□□□ 0.25
RAB38P57729 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB38P57729 KRT8P10-201ENST00000450021 1447 ntBASIC16.59■□□□□ 0.25
RAB38P57729 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB38P57729 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB38P57729 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB38P57729 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB38P57729 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB38P57729 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB38P57729 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAB38P57729 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB38P57729 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAB38P57729 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB38P57729 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.58■□□□□ 0.25
RAB38P57729 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB38P57729 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB38P57729 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB38P57729 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
RAB38P57729 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms