Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PER3P56645 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 AC092183.1-201ENST00000469884 875 ntBASIC16.39■□□□□ 0.21
PER3P56645 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.39■□□□□ 0.21
PER3P56645 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.39■□□□□ 0.21
PER3P56645 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.39■□□□□ 0.21
PER3P56645 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.39■□□□□ 0.21
PER3P56645 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.39■□□□□ 0.21
PER3P56645 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.39■□□□□ 0.21
PER3P56645 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PER3P56645 TP73-AS1-207ENST00000624167 988 ntBASIC16.39■□□□□ 0.21
PER3P56645 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PER3P56645 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PER3P56645 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PER3P56645 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
PER3P56645 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.39■□□□□ 0.21
PER3P56645 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PER3P56645 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.38■□□□□ 0.21
PER3P56645 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PER3P56645 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
PER3P56645 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 RPS2P28-201ENST00000314255 741 ntBASIC16.38■□□□□ 0.21
PER3P56645 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.38■□□□□ 0.21
PER3P56645 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 RN7SL606P-201ENST00000472779 293 ntBASIC16.38■□□□□ 0.21
PER3P56645 AC073648.2-201ENST00000510116 352 ntBASIC16.38■□□□□ 0.21
PER3P56645 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.38■□□□□ 0.21
PER3P56645 AC106730.1-201ENST00000566722 1090 ntBASIC16.38■□□□□ 0.21
PER3P56645 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.38■□□□□ 0.21
PER3P56645 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.38■□□□□ 0.21
PER3P56645 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PER3P56645 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.38■□□□□ 0.21
PER3P56645 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PER3P56645 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
PER3P56645 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.38■□□□□ 0.21
PER3P56645 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.37■□□□□ 0.21
PER3P56645 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PER3P56645 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.37■□□□□ 0.21
PER3P56645 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PER3P56645 KRT89P-201ENST00000620027 1478 ntBASIC16.37■□□□□ 0.21
PER3P56645 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.37■□□□□ 0.21
PER3P56645 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PER3P56645 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PER3P56645 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.37■□□□□ 0.21
PER3P56645 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
PER3P56645 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.37■□□□□ 0.21
PER3P56645 SLC25A1P1-201ENST00000528351 927 ntBASIC16.37■□□□□ 0.21
PER3P56645 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.37■□□□□ 0.21
PER3P56645 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PER3P56645 AC083906.6-201ENST00000641366 219 ntBASIC16.37■□□□□ 0.21
PER3P56645 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PER3P56645 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PER3P56645 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PER3P56645 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PER3P56645 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PER3P56645 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PER3P56645 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.37■□□□□ 0.21
PER3P56645 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PER3P56645 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.37■□□□□ 0.21
PER3P56645 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PER3P56645 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PER3P56645 AL353692.3-201ENST00000407031 1396 ntBASIC16.37■□□□□ 0.21
PER3P56645 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PER3P56645 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PER3P56645 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PER3P56645 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.37■□□□□ 0.21
PER3P56645 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PER3P56645 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.36■□□□□ 0.21
PER3P56645 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.36■□□□□ 0.21
PER3P56645 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PER3P56645 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.36■□□□□ 0.21
PER3P56645 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PER3P56645 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms