Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATXN3P54252 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATXN3P54252 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATXN3P54252 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATXN3P54252 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.07■□□□□ 0.48
ATXN3P54252 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATXN3P54252 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.07■□□□□ 0.48
ATXN3P54252 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.07■□□□□ 0.48
ATXN3P54252 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATXN3P54252 BX842568.4-201ENST00000421222 227 ntBASIC18.07■□□□□ 0.48
ATXN3P54252 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
ATXN3P54252 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.07■□□□□ 0.48
ATXN3P54252 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.07■□□□□ 0.48
ATXN3P54252 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATXN3P54252 RNA5SP419-201ENST00000515908 135 ntBASIC18.07■□□□□ 0.48
ATXN3P54252 AC106730.1-201ENST00000566722 1090 ntBASIC18.07■□□□□ 0.48
ATXN3P54252 MIR5100-201ENST00000579544 119 ntBASIC18.07■□□□□ 0.48
ATXN3P54252 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.07■□□□□ 0.48
ATXN3P54252 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.07■□□□□ 0.48
ATXN3P54252 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.07■□□□□ 0.48
ATXN3P54252 AC008608.2-201ENST00000606089 416 ntBASIC18.07■□□□□ 0.48
ATXN3P54252 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ATXN3P54252 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.07■□□□□ 0.48
ATXN3P54252 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.07■□□□□ 0.48
ATXN3P54252 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATXN3P54252 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATXN3P54252 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATXN3P54252 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.07■□□□□ 0.48
ATXN3P54252 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ATXN3P54252 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATXN3P54252 KRT89P-201ENST00000620027 1478 ntBASIC18.07■□□□□ 0.48
ATXN3P54252 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.07■□□□□ 0.48
ATXN3P54252 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATXN3P54252 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.06■□□□□ 0.48
ATXN3P54252 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
ATXN3P54252 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
ATXN3P54252 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATXN3P54252 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATXN3P54252 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATXN3P54252 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
ATXN3P54252 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATXN3P54252 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
ATXN3P54252 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATXN3P54252 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATXN3P54252 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.06■□□□□ 0.48
ATXN3P54252 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.06■□□□□ 0.48
ATXN3P54252 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.06■□□□□ 0.48
ATXN3P54252 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.06■□□□□ 0.48
ATXN3P54252 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.06■□□□□ 0.48
ATXN3P54252 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.06■□□□□ 0.48
ATXN3P54252 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.06■□□□□ 0.48
ATXN3P54252 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.06■□□□□ 0.48
ATXN3P54252 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.06■□□□□ 0.48
ATXN3P54252 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATXN3P54252 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATXN3P54252 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.06■□□□□ 0.48
ATXN3P54252 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATXN3P54252 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.06■□□□□ 0.48
ATXN3P54252 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
ATXN3P54252 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATXN3P54252 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATXN3P54252 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ATXN3P54252 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ATXN3P54252 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATXN3P54252 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.06■□□□□ 0.48
ATXN3P54252 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.06■□□□□ 0.48
ATXN3P54252 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.05■□□□□ 0.48
ATXN3P54252 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.05■□□□□ 0.48
ATXN3P54252 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.05■□□□□ 0.48
ATXN3P54252 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.05■□□□□ 0.48
ATXN3P54252 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 RPS2P28-201ENST00000314255 741 ntBASIC18.05■□□□□ 0.48
ATXN3P54252 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ATXN3P54252 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 AC091607.1-201ENST00000490318 1060 ntBASIC18.05■□□□□ 0.48
ATXN3P54252 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.05■□□□□ 0.48
ATXN3P54252 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.05■□□□□ 0.48
ATXN3P54252 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.05■□□□□ 0.48
ATXN3P54252 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 FEM1AP3-201ENST00000403722 1741 ntBASIC18.05■□□□□ 0.48
ATXN3P54252 KRT8P32-201ENST00000512863 1461 ntBASIC18.05■□□□□ 0.48
ATXN3P54252 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ATXN3P54252 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.05■□□□□ 0.48
ATXN3P54252 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATXN3P54252 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms