Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLCN3P51790 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN3P51790 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN3P51790 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN3P51790 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.38■□□□□ 0.69
CLCN3P51790 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CLCN3P51790 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN3P51790 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN3P51790 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN3P51790 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN3P51790 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.37■□□□□ 0.69
CLCN3P51790 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN3P51790 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN3P51790 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN3P51790 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CLCN3P51790 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.37■□□□□ 0.69
CLCN3P51790 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CLCN3P51790 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.37■□□□□ 0.69
CLCN3P51790 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.37■□□□□ 0.69
CLCN3P51790 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN3P51790 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN3P51790 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN3P51790 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN3P51790 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.37■□□□□ 0.69
CLCN3P51790 IGHV3-52-201ENST00000519770 353 ntBASIC19.37■□□□□ 0.69
CLCN3P51790 UNC93B6-202ENST00000528242 690 ntBASIC19.37■□□□□ 0.69
CLCN3P51790 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN3P51790 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CLCN3P51790 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.37■□□□□ 0.69
CLCN3P51790 AL356488.2-201ENST00000602755 427 ntBASIC19.37■□□□□ 0.69
CLCN3P51790 Z83851.2-201ENST00000609564 659 ntBASIC19.37■□□□□ 0.69
CLCN3P51790 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.37■□□□□ 0.69
CLCN3P51790 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN3P51790 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN3P51790 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.37■□□□□ 0.69
CLCN3P51790 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN3P51790 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CLCN3P51790 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.37■□□□□ 0.69
CLCN3P51790 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN3P51790 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN3P51790 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CLCN3P51790 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN3P51790 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCN3P51790 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCN3P51790 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN3P51790 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.36■□□□□ 0.69
CLCN3P51790 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCN3P51790 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN3P51790 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCN3P51790 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.36■□□□□ 0.69
CLCN3P51790 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN3P51790 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
CLCN3P51790 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN3P51790 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN3P51790 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.36■□□□□ 0.69
CLCN3P51790 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.36■□□□□ 0.69
CLCN3P51790 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.36■□□□□ 0.69
CLCN3P51790 STK19B-204ENST00000512515 211 ntBASIC19.36■□□□□ 0.69
CLCN3P51790 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCN3P51790 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CLCN3P51790 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCN3P51790 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.36■□□□□ 0.69
CLCN3P51790 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCN3P51790 AC006557.2-201ENST00000592985 1240 ntBASIC19.36■□□□□ 0.69
CLCN3P51790 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN3P51790 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CLCN3P51790 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN3P51790 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CLCN3P51790 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.36■□□□□ 0.69
CLCN3P51790 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN3P51790 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CLCN3P51790 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN3P51790 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCN3P51790 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.36■□□□□ 0.69
CLCN3P51790 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN3P51790 AL354751.1-201ENST00000412768 1863 ntBASIC19.35■□□□□ 0.69
CLCN3P51790 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN3P51790 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN3P51790 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN3P51790 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.35■□□□□ 0.69
CLCN3P51790 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN3P51790 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN3P51790 AC073621.1-201ENST00000392730 636 ntBASIC19.35■□□□□ 0.69
CLCN3P51790 ELK2BP-201ENST00000415014 1224 ntBASIC19.35■□□□□ 0.69
CLCN3P51790 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.35■□□□□ 0.69
CLCN3P51790 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.35■□□□□ 0.69
CLCN3P51790 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN3P51790 TERC-201ENST00000602385 541 ntBASIC19.35■□□□□ 0.69
CLCN3P51790 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
CLCN3P51790 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN3P51790 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLCN3P51790 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.35■□□□□ 0.69
CLCN3P51790 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.35■□□□□ 0.69
CLCN3P51790 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLCN3P51790 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CLCN3P51790 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.35■□□□□ 0.69
CLCN3P51790 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN3P51790 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CLCN3P51790 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLCN3P51790 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms