Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK2P49760 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
CLK2P49760 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK2P49760 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK2P49760 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CLK2P49760 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.97■□□□□ 0.79
CLK2P49760 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLK2P49760 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLK2P49760 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.96■□□□□ 0.79
CLK2P49760 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLK2P49760 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLK2P49760 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLK2P49760 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.96■□□□□ 0.79
CLK2P49760 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLK2P49760 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLK2P49760 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.96■□□□□ 0.79
CLK2P49760 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLK2P49760 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLK2P49760 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.96■□□□□ 0.79
CLK2P49760 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CLK2P49760 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLK2P49760 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CLK2P49760 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLK2P49760 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.96■□□□□ 0.79
CLK2P49760 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CLK2P49760 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.96■□□□□ 0.79
CLK2P49760 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.96■□□□□ 0.79
CLK2P49760 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.96■□□□□ 0.79
CLK2P49760 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.96■□□□□ 0.79
CLK2P49760 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.96■□□□□ 0.79
CLK2P49760 MTDHP4-201ENST00000600287 670 ntBASIC19.96■□□□□ 0.79
CLK2P49760 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CLK2P49760 AL022326.1-202ENST00000641533 845 ntBASIC19.96■□□□□ 0.79
CLK2P49760 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLK2P49760 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLK2P49760 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLK2P49760 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLK2P49760 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.96■□□□□ 0.79
CLK2P49760 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CLK2P49760 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CLK2P49760 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CLK2P49760 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
CLK2P49760 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.96■□□□□ 0.79
CLK2P49760 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLK2P49760 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.96■□□□□ 0.79
CLK2P49760 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLK2P49760 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.79
CLK2P49760 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.95■□□□□ 0.78
CLK2P49760 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLK2P49760 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CLK2P49760 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLK2P49760 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLK2P49760 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
CLK2P49760 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLK2P49760 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CLK2P49760 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLK2P49760 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLK2P49760 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLK2P49760 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.95■□□□□ 0.78
CLK2P49760 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.95■□□□□ 0.78
CLK2P49760 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLK2P49760 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLK2P49760 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLK2P49760 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.95■□□□□ 0.78
CLK2P49760 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.95■□□□□ 0.78
CLK2P49760 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.95■□□□□ 0.78
CLK2P49760 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
CLK2P49760 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLK2P49760 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.95■□□□□ 0.78
CLK2P49760 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLK2P49760 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CLK2P49760 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLK2P49760 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CLK2P49760 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CLK2P49760 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
CLK2P49760 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLK2P49760 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CLK2P49760 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLK2P49760 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLK2P49760 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLK2P49760 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLK2P49760 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
CLK2P49760 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.94■□□□□ 0.78
CLK2P49760 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLK2P49760 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CLK2P49760 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CLK2P49760 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLK2P49760 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLK2P49760 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CLK2P49760 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.94■□□□□ 0.78
CLK2P49760 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.94■□□□□ 0.78
CLK2P49760 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.94■□□□□ 0.78
CLK2P49760 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
CLK2P49760 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLK2P49760 HLA-A-201ENST00000376802 1334 ntBASIC19.94■□□□□ 0.78
CLK2P49760 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLK2P49760 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLK2P49760 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CLK2P49760 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLK2P49760 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms