Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.79■□□□□ 0.92
NEDD4P46934 HLA-J-201ENST00000462773 1622 ntBASIC20.79■□□□□ 0.92
NEDD4P46934 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD4P46934 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD4P46934 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.78■□□□□ 0.92
NEDD4P46934 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD4P46934 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.78■□□□□ 0.92
NEDD4P46934 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD4P46934 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD4P46934 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.78■□□□□ 0.92
NEDD4P46934 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD4P46934 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NEDD4P46934 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD4P46934 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.78■□□□□ 0.92
NEDD4P46934 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.78■□□□□ 0.92
NEDD4P46934 AC133963.1-201ENST00000504166 1679 ntBASIC20.78■□□□□ 0.92
NEDD4P46934 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
NEDD4P46934 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.78■□□□□ 0.92
NEDD4P46934 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD4P46934 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD4P46934 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD4P46934 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
NEDD4P46934 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD4P46934 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.78■□□□□ 0.92
NEDD4P46934 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD4P46934 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD4P46934 AC103564.2-201ENST00000432853 1299 ntBASIC20.78■□□□□ 0.92
NEDD4P46934 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.78■□□□□ 0.92
NEDD4P46934 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD4P46934 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.78■□□□□ 0.92
NEDD4P46934 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.78■□□□□ 0.92
NEDD4P46934 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.78■□□□□ 0.92
NEDD4P46934 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.78■□□□□ 0.92
NEDD4P46934 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD4P46934 AP005117.1-201ENST00000584346 1413 ntBASIC20.78■□□□□ 0.92
NEDD4P46934 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NEDD4P46934 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.78■□□□□ 0.92
NEDD4P46934 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.78■□□□□ 0.92
NEDD4P46934 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.78■□□□□ 0.92
NEDD4P46934 TP73-AS1-207ENST00000624167 988 ntBASIC20.78■□□□□ 0.92
NEDD4P46934 AC073592.5-201ENST00000624854 528 ntBASIC20.78■□□□□ 0.92
NEDD4P46934 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.77■□□□□ 0.92
NEDD4P46934 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD4P46934 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.77■□□□□ 0.92
NEDD4P46934 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD4P46934 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.77■□□□□ 0.92
NEDD4P46934 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.77■□□□□ 0.92
NEDD4P46934 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD4P46934 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD4P46934 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD4P46934 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD4P46934 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD4P46934 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD4P46934 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEDD4P46934 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NEDD4P46934 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NEDD4P46934 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.91
NEDD4P46934 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
NEDD4P46934 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.77■□□□□ 0.91
NEDD4P46934 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.77■□□□□ 0.91
NEDD4P46934 FGFR3P6-201ENST00000457012 610 ntBASIC20.77■□□□□ 0.91
NEDD4P46934 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.77■□□□□ 0.91
NEDD4P46934 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.77■□□□□ 0.91
NEDD4P46934 AC008608.2-201ENST00000606089 416 ntBASIC20.77■□□□□ 0.91
NEDD4P46934 AL031008.1-201ENST00000619963 541 ntBASIC20.77■□□□□ 0.91
NEDD4P46934 LINC01451-201ENST00000623792 534 ntBASIC20.77■□□□□ 0.91
NEDD4P46934 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NEDD4P46934 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
NEDD4P46934 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
NEDD4P46934 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.76■□□□□ 0.91
NEDD4P46934 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD4P46934 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD4P46934 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
NEDD4P46934 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NEDD4P46934 AC148477.5-201ENST00000625164 1645 ntBASIC20.76■□□□□ 0.91
NEDD4P46934 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.76■□□□□ 0.91
NEDD4P46934 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NEDD4P46934 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD4P46934 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD4P46934 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD4P46934 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD4P46934 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
NEDD4P46934 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.76■□□□□ 0.91
NEDD4P46934 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD4P46934 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.76■□□□□ 0.91
NEDD4P46934 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD4P46934 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD4P46934 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD4P46934 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD4P46934 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD4P46934 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.76■□□□□ 0.91
NEDD4P46934 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD4P46934 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
NEDD4P46934 AL355877.3-201ENST00000622820 899 ntBASIC20.76■□□□□ 0.91
NEDD4P46934 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD4P46934 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD4P46934 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NEDD4P46934 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEDD4P46934 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NEDD4P46934 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms