Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CNGA1P29973 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CNGA1P29973 AC073621.1-201ENST00000392730 636 ntBASIC20.07■□□□□ 0.8
CNGA1P29973 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.07■□□□□ 0.8
CNGA1P29973 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNGA1P29973 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.07■□□□□ 0.8
CNGA1P29973 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.07■□□□□ 0.8
CNGA1P29973 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.07■□□□□ 0.8
CNGA1P29973 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CNGA1P29973 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNGA1P29973 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.07■□□□□ 0.8
CNGA1P29973 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.07■□□□□ 0.8
CNGA1P29973 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNGA1P29973 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNGA1P29973 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNGA1P29973 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.07■□□□□ 0.8
CNGA1P29973 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNGA1P29973 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.07■□□□□ 0.8
CNGA1P29973 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CNGA1P29973 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CNGA1P29973 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CNGA1P29973 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.06■□□□□ 0.8
CNGA1P29973 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 MCCD1P2-201ENST00000423228 335 ntBASIC20.06■□□□□ 0.8
CNGA1P29973 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CNGA1P29973 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.06■□□□□ 0.8
CNGA1P29973 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.06■□□□□ 0.8
CNGA1P29973 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.06■□□□□ 0.8
CNGA1P29973 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.06■□□□□ 0.8
CNGA1P29973 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.06■□□□□ 0.8
CNGA1P29973 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CNGA1P29973 MIR4469-201ENST00000583919 79 ntBASIC20.06■□□□□ 0.8
CNGA1P29973 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.06■□□□□ 0.8
CNGA1P29973 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CNGA1P29973 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CNGA1P29973 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.06■□□□□ 0.8
CNGA1P29973 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNGA1P29973 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.06■□□□□ 0.8
CNGA1P29973 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNGA1P29973 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNGA1P29973 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.05■□□□□ 0.8
CNGA1P29973 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CNGA1P29973 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CNGA1P29973 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNGA1P29973 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNGA1P29973 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNGA1P29973 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CNGA1P29973 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNGA1P29973 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.05■□□□□ 0.8
CNGA1P29973 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.05■□□□□ 0.8
CNGA1P29973 CRYGEP-201ENST00000412192 528 ntBASIC20.05■□□□□ 0.8
CNGA1P29973 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.05■□□□□ 0.8
CNGA1P29973 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CNGA1P29973 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.05■□□□□ 0.8
CNGA1P29973 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.05■□□□□ 0.8
CNGA1P29973 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
CNGA1P29973 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNGA1P29973 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNGA1P29973 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.05■□□□□ 0.8
CNGA1P29973 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.05■□□□□ 0.8
CNGA1P29973 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CNGA1P29973 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNGA1P29973 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CNGA1P29973 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNGA1P29973 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNGA1P29973 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.05■□□□□ 0.8
CNGA1P29973 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNGA1P29973 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNGA1P29973 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.04■□□□□ 0.8
CNGA1P29973 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNGA1P29973 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CNGA1P29973 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNGA1P29973 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.04■□□□□ 0.8
CNGA1P29973 ESPNP-201ENST00000270691 2015 ntBASIC20.04■□□□□ 0.8
CNGA1P29973 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CNGA1P29973 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.04■□□□□ 0.8
CNGA1P29973 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNGA1P29973 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNGA1P29973 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CNGA1P29973 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.04■□□□□ 0.8
CNGA1P29973 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNGA1P29973 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNGA1P29973 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms