Protein–RNA interactions for Protein: P28328

PEX2, Peroxisome biogenesis factor 2, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX2P28328 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX2P28328 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX2P28328 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.66■□□□□ 0.26
PEX2P28328 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX2P28328 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PEX2P28328 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX2P28328 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX2P28328 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX2P28328 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.66■□□□□ 0.26
PEX2P28328 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX2P28328 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX2P28328 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PEX2P28328 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PEX2P28328 TSPY6P-201ENST00000448518 926 ntBASIC16.66■□□□□ 0.26
PEX2P28328 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.66■□□□□ 0.26
PEX2P28328 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PEX2P28328 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PEX2P28328 CKBP1-201ENST00000565489 1086 ntBASIC16.66■□□□□ 0.26
PEX2P28328 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.66■□□□□ 0.26
PEX2P28328 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.66■□□□□ 0.26
PEX2P28328 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.66■□□□□ 0.26
PEX2P28328 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX2P28328 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.66■□□□□ 0.26
PEX2P28328 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.66■□□□□ 0.26
PEX2P28328 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX2P28328 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX2P28328 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX2P28328 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PEX2P28328 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PEX2P28328 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PEX2P28328 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PEX2P28328 AC046185.3-201ENST00000623228 1824 ntBASIC16.66■□□□□ 0.26
PEX2P28328 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PEX2P28328 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PEX2P28328 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.65■□□□□ 0.26
PEX2P28328 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PEX2P28328 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
PEX2P28328 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PEX2P28328 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PEX2P28328 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
PEX2P28328 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
PEX2P28328 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.65■□□□□ 0.26
PEX2P28328 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PEX2P28328 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PEX2P28328 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PEX2P28328 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PEX2P28328 AC024909.3-201ENST00000611513 2257 ntBASIC16.65■□□□□ 0.26
PEX2P28328 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PEX2P28328 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PEX2P28328 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.65■□□□□ 0.26
PEX2P28328 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.65■□□□□ 0.26
PEX2P28328 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.65■□□□□ 0.26
PEX2P28328 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.65■□□□□ 0.26
PEX2P28328 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PEX2P28328 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
PEX2P28328 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PEX2P28328 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PEX2P28328 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PEX2P28328 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PEX2P28328 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PEX2P28328 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
PEX2P28328 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PEX2P28328 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PEX2P28328 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.65■□□□□ 0.26
PEX2P28328 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PEX2P28328 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PEX2P28328 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
PEX2P28328 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PEX2P28328 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PEX2P28328 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PEX2P28328 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PEX2P28328 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PEX2P28328 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PEX2P28328 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.64■□□□□ 0.25
PEX2P28328 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PEX2P28328 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
PEX2P28328 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PEX2P28328 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PEX2P28328 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PEX2P28328 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PEX2P28328 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PEX2P28328 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PEX2P28328 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PEX2P28328 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PEX2P28328 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PEX2P28328 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PEX2P28328 AC004980.1-204ENST00000429707 299 ntBASIC16.64■□□□□ 0.25
PEX2P28328 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.64■□□□□ 0.25
PEX2P28328 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.64■□□□□ 0.25
PEX2P28328 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.64■□□□□ 0.25
PEX2P28328 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.64■□□□□ 0.25
PEX2P28328 AL445675.2-201ENST00000620291 557 ntBASIC16.64■□□□□ 0.25
PEX2P28328 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PEX2P28328 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PEX2P28328 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.64■□□□□ 0.25
PEX2P28328 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PEX2P28328 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
PEX2P28328 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PEX2P28328 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PEX2P28328 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms