Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.54■□□□□ 0.08
UBCP0CG48 AL121761.2-201ENST00000598007 1648 ntBASIC15.54■□□□□ 0.08
UBCP0CG48 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBCP0CG48 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBCP0CG48 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBCP0CG48 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.53■□□□□ 0.08
UBCP0CG48 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBCP0CG48 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBCP0CG48 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBCP0CG48 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.53■□□□□ 0.08
UBCP0CG48 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
UBCP0CG48 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.53■□□□□ 0.08
UBCP0CG48 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
UBCP0CG48 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBCP0CG48 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBCP0CG48 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBCP0CG48 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBCP0CG48 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.53■□□□□ 0.08
UBCP0CG48 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBCP0CG48 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.53■□□□□ 0.08
UBCP0CG48 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
UBCP0CG48 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBCP0CG48 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.53■□□□□ 0.08
UBCP0CG48 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.53■□□□□ 0.08
UBCP0CG48 AC024563.2-201ENST00000603282 481 ntBASIC15.53■□□□□ 0.08
UBCP0CG48 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.53■□□□□ 0.08
UBCP0CG48 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBCP0CG48 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
UBCP0CG48 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
UBCP0CG48 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBCP0CG48 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
UBCP0CG48 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.53■□□□□ 0.08
UBCP0CG48 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBCP0CG48 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
UBCP0CG48 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBCP0CG48 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
UBCP0CG48 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
UBCP0CG48 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
UBCP0CG48 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.52■□□□□ 0.08
UBCP0CG48 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBCP0CG48 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
UBCP0CG48 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBCP0CG48 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
UBCP0CG48 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.52■□□□□ 0.08
UBCP0CG48 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBCP0CG48 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBCP0CG48 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBCP0CG48 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBCP0CG48 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBCP0CG48 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBCP0CG48 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBCP0CG48 AL391005.1-201ENST00000623953 2435 ntBASIC15.52■□□□□ 0.08
UBCP0CG48 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.52■□□□□ 0.08
UBCP0CG48 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
UBCP0CG48 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBCP0CG48 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBCP0CG48 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBCP0CG48 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
UBCP0CG48 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBCP0CG48 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.52■□□□□ 0.08
UBCP0CG48 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBCP0CG48 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.52■□□□□ 0.08
UBCP0CG48 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.52■□□□□ 0.08
UBCP0CG48 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.52■□□□□ 0.08
UBCP0CG48 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.52■□□□□ 0.08
UBCP0CG48 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.52■□□□□ 0.08
UBCP0CG48 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.52■□□□□ 0.08
UBCP0CG48 TMEM191A-211ENST00000637163 1067 ntBASIC15.52■□□□□ 0.08
UBCP0CG48 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBCP0CG48 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBCP0CG48 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.52■□□□□ 0.07
UBCP0CG48 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
UBCP0CG48 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBCP0CG48 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
UBCP0CG48 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBCP0CG48 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBCP0CG48 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
UBCP0CG48 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBCP0CG48 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBCP0CG48 REXO1L11P-201ENST00000620964 1927 ntBASIC15.51■□□□□ 0.07
UBCP0CG48 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBCP0CG48 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBCP0CG48 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBCP0CG48 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBCP0CG48 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBCP0CG48 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
UBCP0CG48 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBCP0CG48 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
UBCP0CG48 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBCP0CG48 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.51■□□□□ 0.07
UBCP0CG48 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.51■□□□□ 0.07
UBCP0CG48 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.51■□□□□ 0.07
UBCP0CG48 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBCP0CG48 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
UBCP0CG48 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.51■□□□□ 0.07
UBCP0CG48 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.51■□□□□ 0.07
UBCP0CG48 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms