Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 AC010460.3-201ENST00000511359 1579 ntBASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 AC073592.4-201ENST00000623827 446 ntBASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 LAGE3P1-201ENST00000425356 484 ntBASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 PRYP5-201ENST00000451909 266 ntBASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 AC105339.3-201ENST00000560043 636 ntBASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 PMS2P7-201ENST00000506558 1336 ntBASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAB40ALP0C0E4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RAB40ALP0C0E4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RAB40ALP0C0E4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RAB40ALP0C0E4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.64■□□□□ 0.26
RAB40ALP0C0E4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 TERC-201ENST00000602385 541 ntBASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 AL022326.1-202ENST00000641533 845 ntBASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 LTB4R2-202ENST00000528054 3092 ntBASIC16.64■□□□□ 0.25
RAB40ALP0C0E4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms