Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLTAP09496 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CLTAP09496 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLTAP09496 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLTAP09496 AC007967.3-201ENST00000434308 558 ntBASIC19.34■□□□□ 0.69
CLTAP09496 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.34■□□□□ 0.69
CLTAP09496 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.34■□□□□ 0.69
CLTAP09496 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.34■□□□□ 0.69
CLTAP09496 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.34■□□□□ 0.69
CLTAP09496 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.34■□□□□ 0.69
CLTAP09496 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.34■□□□□ 0.69
CLTAP09496 RN7SL510P-201ENST00000581311 263 ntBASIC19.34■□□□□ 0.69
CLTAP09496 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.34■□□□□ 0.69
CLTAP09496 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLTAP09496 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CLTAP09496 KRT18P55-202ENST00000578578 1546 ntBASIC19.34■□□□□ 0.69
CLTAP09496 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLTAP09496 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CLTAP09496 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.34■□□□□ 0.69
CLTAP09496 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.34■□□□□ 0.69
CLTAP09496 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLTAP09496 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLTAP09496 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLTAP09496 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.34■□□□□ 0.69
CLTAP09496 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLTAP09496 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLTAP09496 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLTAP09496 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.33■□□□□ 0.69
CLTAP09496 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.33■□□□□ 0.69
CLTAP09496 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CLTAP09496 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLTAP09496 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLTAP09496 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLTAP09496 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLTAP09496 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CLTAP09496 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLTAP09496 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLTAP09496 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CLTAP09496 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLTAP09496 FAM220CP-201ENST00000395253 831 ntBASIC19.33■□□□□ 0.68
CLTAP09496 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.33■□□□□ 0.68
CLTAP09496 TPM4P1-201ENST00000436100 807 ntBASIC19.33■□□□□ 0.68
CLTAP09496 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLTAP09496 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.33■□□□□ 0.68
CLTAP09496 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.33■□□□□ 0.68
CLTAP09496 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.33■□□□□ 0.68
CLTAP09496 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.33■□□□□ 0.68
CLTAP09496 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLTAP09496 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLTAP09496 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLTAP09496 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.33■□□□□ 0.68
CLTAP09496 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLTAP09496 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLTAP09496 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.33■□□□□ 0.68
CLTAP09496 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CLTAP09496 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLTAP09496 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLTAP09496 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLTAP09496 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLTAP09496 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CLTAP09496 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLTAP09496 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CLTAP09496 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CLTAP09496 AC010460.3-201ENST00000511359 1579 ntBASIC19.32■□□□□ 0.68
CLTAP09496 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
CLTAP09496 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLTAP09496 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.32■□□□□ 0.68
CLTAP09496 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLTAP09496 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLTAP09496 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.32■□□□□ 0.68
CLTAP09496 SLC25A6P5-201ENST00000435663 894 ntBASIC19.32■□□□□ 0.68
CLTAP09496 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLTAP09496 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLTAP09496 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.32■□□□□ 0.68
CLTAP09496 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLTAP09496 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CLTAP09496 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLTAP09496 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLTAP09496 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.32■□□□□ 0.68
CLTAP09496 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLTAP09496 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLTAP09496 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLTAP09496 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLTAP09496 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
CLTAP09496 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLTAP09496 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CLTAP09496 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLTAP09496 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.32■□□□□ 0.68
CLTAP09496 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLTAP09496 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.32■□□□□ 0.68
CLTAP09496 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.32■□□□□ 0.68
CLTAP09496 AC139713.2-201ENST00000641328 2723 ntBASIC19.31■□□□□ 0.68
CLTAP09496 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.31■□□□□ 0.68
CLTAP09496 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLTAP09496 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLTAP09496 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.31■□□□□ 0.68
CLTAP09496 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CLTAP09496 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLTAP09496 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLTAP09496 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms