Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.82■□□□□ 0.44
RETP07949 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RETP07949 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RETP07949 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 AC138932.1-201ENST00000534164 6830 ntBASIC17.81■□□□□ 0.44
RETP07949 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
RETP07949 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.81■□□□□ 0.44
RETP07949 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.81■□□□□ 0.44
RETP07949 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RETP07949 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.81■□□□□ 0.44
RETP07949 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RETP07949 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.81■□□□□ 0.44
RETP07949 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.81■□□□□ 0.44
RETP07949 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RETP07949 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RETP07949 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.81■□□□□ 0.44
RETP07949 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.81■□□□□ 0.44
RETP07949 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RETP07949 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.81■□□□□ 0.44
RETP07949 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RETP07949 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.81■□□□□ 0.44
RETP07949 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RETP07949 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RETP07949 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
RETP07949 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.81■□□□□ 0.44
RETP07949 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 AC097374.2-201ENST00000618617 1306 ntBASIC17.8■□□□□ 0.44
RETP07949 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RETP07949 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.8■□□□□ 0.44
RETP07949 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RETP07949 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.8■□□□□ 0.44
RETP07949 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.8■□□□□ 0.44
RETP07949 AC108751.1-201ENST00000490852 363 ntBASIC17.8■□□□□ 0.44
RETP07949 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.8■□□□□ 0.44
RETP07949 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.8■□□□□ 0.44
RETP07949 AC006557.2-201ENST00000592985 1240 ntBASIC17.8■□□□□ 0.44
RETP07949 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
RETP07949 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.8■□□□□ 0.44
RETP07949 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.8■□□□□ 0.44
RETP07949 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RETP07949 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
RETP07949 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.79■□□□□ 0.44
RETP07949 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RETP07949 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RETP07949 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.79■□□□□ 0.44
RETP07949 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.79■□□□□ 0.44
RETP07949 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.79■□□□□ 0.44
RETP07949 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RETP07949 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RETP07949 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RETP07949 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RETP07949 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RETP07949 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RETP07949 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RETP07949 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RETP07949 COX20P2-201ENST00000452636 358 ntBASIC17.79■□□□□ 0.44
RETP07949 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.79■□□□□ 0.44
RETP07949 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.79■□□□□ 0.44
RETP07949 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.79■□□□□ 0.44
RETP07949 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.79■□□□□ 0.44
RETP07949 AC106028.4-201ENST00000614509 607 ntBASIC17.79■□□□□ 0.44
RETP07949 C20orf181-201ENST00000623918 480 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms