Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNA1P02708 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNA1P02708 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNA1P02708 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNA1P02708 HMGN1P19-201ENST00000436976 333 ntBASIC19.13■□□□□ 0.65
CHRNA1P02708 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNA1P02708 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.13■□□□□ 0.65
CHRNA1P02708 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.13■□□□□ 0.65
CHRNA1P02708 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.13■□□□□ 0.65
CHRNA1P02708 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.13■□□□□ 0.65
CHRNA1P02708 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CHRNA1P02708 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNA1P02708 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.13■□□□□ 0.65
CHRNA1P02708 AC010654.1-201ENST00000615722 808 ntBASIC19.13■□□□□ 0.65
CHRNA1P02708 C20orf181-201ENST00000623918 480 ntBASIC19.13■□□□□ 0.65
CHRNA1P02708 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNA1P02708 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.13■□□□□ 0.65
CHRNA1P02708 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.13■□□□□ 0.65
CHRNA1P02708 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.13■□□□□ 0.65
CHRNA1P02708 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CHRNA1P02708 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNA1P02708 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNA1P02708 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNA1P02708 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.12■□□□□ 0.65
CHRNA1P02708 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNA1P02708 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNA1P02708 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
CHRNA1P02708 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNA1P02708 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNA1P02708 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.12■□□□□ 0.65
CHRNA1P02708 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNA1P02708 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNA1P02708 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNA1P02708 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNA1P02708 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNA1P02708 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNA1P02708 AP002414.1-201ENST00000391405 1147 ntBASIC19.12■□□□□ 0.65
CHRNA1P02708 MRPL20P1-201ENST00000400819 433 ntBASIC19.12■□□□□ 0.65
CHRNA1P02708 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.12■□□□□ 0.65
CHRNA1P02708 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.12■□□□□ 0.65
CHRNA1P02708 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.12■□□□□ 0.65
CHRNA1P02708 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CHRNA1P02708 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.12■□□□□ 0.65
CHRNA1P02708 AL355385.1-201ENST00000606123 409 ntBASIC19.12■□□□□ 0.65
CHRNA1P02708 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CHRNA1P02708 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNA1P02708 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNA1P02708 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNA1P02708 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNA1P02708 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRNA1P02708 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHRNA1P02708 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHRNA1P02708 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRNA1P02708 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.11■□□□□ 0.65
CHRNA1P02708 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CHRNA1P02708 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.11■□□□□ 0.65
CHRNA1P02708 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRNA1P02708 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRNA1P02708 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRNA1P02708 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHRNA1P02708 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.11■□□□□ 0.65
CHRNA1P02708 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
CHRNA1P02708 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.11■□□□□ 0.65
CHRNA1P02708 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.11■□□□□ 0.65
CHRNA1P02708 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.11■□□□□ 0.65
CHRNA1P02708 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.11■□□□□ 0.65
CHRNA1P02708 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CHRNA1P02708 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.11■□□□□ 0.65
CHRNA1P02708 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.11■□□□□ 0.65
CHRNA1P02708 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CHRNA1P02708 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CHRNA1P02708 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA1P02708 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.1■□□□□ 0.65
CHRNA1P02708 KRT18P55-202ENST00000578578 1546 ntBASIC19.1■□□□□ 0.65
CHRNA1P02708 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.1■□□□□ 0.65
CHRNA1P02708 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA1P02708 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA1P02708 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA1P02708 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.1■□□□□ 0.65
CHRNA1P02708 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA1P02708 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA1P02708 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA1P02708 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA1P02708 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
CHRNA1P02708 HTR5BP-201ENST00000430851 1154 ntBASIC19.1■□□□□ 0.65
CHRNA1P02708 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.1■□□□□ 0.65
CHRNA1P02708 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.1■□□□□ 0.65
CHRNA1P02708 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.1■□□□□ 0.65
CHRNA1P02708 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.1■□□□□ 0.65
CHRNA1P02708 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.1■□□□□ 0.65
CHRNA1P02708 AC004877.2-201ENST00000623941 599 ntBASIC19.1■□□□□ 0.65
CHRNA1P02708 AC010507.1-201ENST00000633895 436 ntBASIC19.1■□□□□ 0.65
CHRNA1P02708 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA1P02708 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA1P02708 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA1P02708 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA1P02708 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.1■□□□□ 0.65
CHRNA1P02708 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA1P02708 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.1■□□□□ 0.65
CHRNA1P02708 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms