Protein–RNA interactions for Protein: O95696

BRD1, Bromodomain-containing protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1O95696 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRD1O95696 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRD1O95696 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
BRD1O95696 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRD1O95696 TPM4P1-201ENST00000436100 807 ntBASIC20.6■□□□□ 0.89
BRD1O95696 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.6■□□□□ 0.89
BRD1O95696 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.6■□□□□ 0.89
BRD1O95696 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.6■□□□□ 0.89
BRD1O95696 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.6■□□□□ 0.89
BRD1O95696 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.6■□□□□ 0.89
BRD1O95696 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.6■□□□□ 0.89
BRD1O95696 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BRD1O95696 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.6■□□□□ 0.89
BRD1O95696 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BRD1O95696 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BRD1O95696 KRT89P-201ENST00000620027 1478 ntBASIC20.6■□□□□ 0.89
BRD1O95696 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRD1O95696 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
BRD1O95696 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.6■□□□□ 0.89
BRD1O95696 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRD1O95696 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRD1O95696 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BRD1O95696 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRD1O95696 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.59■□□□□ 0.89
BRD1O95696 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
BRD1O95696 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRD1O95696 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRD1O95696 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRD1O95696 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BRD1O95696 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRD1O95696 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRD1O95696 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRD1O95696 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRD1O95696 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
BRD1O95696 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
BRD1O95696 AK4P3-201ENST00000418260 669 ntBASIC20.59■□□□□ 0.89
BRD1O95696 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.59■□□□□ 0.89
BRD1O95696 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRD1O95696 AC022616.7-201ENST00000525383 220 ntBASIC20.59■□□□□ 0.89
BRD1O95696 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.59■□□□□ 0.89
BRD1O95696 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.59■□□□□ 0.89
BRD1O95696 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
BRD1O95696 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
BRD1O95696 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.59■□□□□ 0.89
BRD1O95696 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRD1O95696 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRD1O95696 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRD1O95696 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRD1O95696 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRD1O95696 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRD1O95696 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
BRD1O95696 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRD1O95696 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
BRD1O95696 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRD1O95696 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRD1O95696 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
BRD1O95696 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRD1O95696 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRD1O95696 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRD1O95696 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRD1O95696 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRD1O95696 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.58■□□□□ 0.89
BRD1O95696 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.58■□□□□ 0.89
BRD1O95696 BX664615.1-201ENST00000443558 458 ntBASIC20.58■□□□□ 0.89
BRD1O95696 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
BRD1O95696 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRD1O95696 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.58■□□□□ 0.89
BRD1O95696 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.58■□□□□ 0.89
BRD1O95696 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.58■□□□□ 0.89
BRD1O95696 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRD1O95696 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.58■□□□□ 0.88
BRD1O95696 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRD1O95696 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
BRD1O95696 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BRD1O95696 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRD1O95696 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
BRD1O95696 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
BRD1O95696 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD1O95696 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
BRD1O95696 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRD1O95696 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD1O95696 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD1O95696 PCDHB19P-201ENST00000570871 2371 ntBASIC20.57■□□□□ 0.88
BRD1O95696 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD1O95696 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRD1O95696 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRD1O95696 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD1O95696 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD1O95696 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
BRD1O95696 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.57■□□□□ 0.88
BRD1O95696 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.57■□□□□ 0.88
BRD1O95696 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.57■□□□□ 0.88
BRD1O95696 KRT18P56-201ENST00000507275 550 ntBASIC20.57■□□□□ 0.88
BRD1O95696 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.57■□□□□ 0.88
BRD1O95696 KRT126P-201ENST00000549467 1181 ntBASIC20.57■□□□□ 0.88
BRD1O95696 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
BRD1O95696 AC024563.2-201ENST00000603282 481 ntBASIC20.57■□□□□ 0.88
BRD1O95696 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRD1O95696 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRD1O95696 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms