Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.78■□□□□ 0.44
VAPBO95292 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.78■□□□□ 0.44
VAPBO95292 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VAPBO95292 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.78■□□□□ 0.44
VAPBO95292 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.78■□□□□ 0.44
VAPBO95292 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.78■□□□□ 0.44
VAPBO95292 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.78■□□□□ 0.44
VAPBO95292 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.78■□□□□ 0.44
VAPBO95292 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
VAPBO95292 AL645929.1-201ENST00000420084 975 ntBASIC17.78■□□□□ 0.44
VAPBO95292 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.78■□□□□ 0.44
VAPBO95292 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VAPBO95292 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VAPBO95292 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.78■□□□□ 0.44
VAPBO95292 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.78■□□□□ 0.44
VAPBO95292 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
VAPBO95292 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VAPBO95292 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VAPBO95292 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VAPBO95292 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VAPBO95292 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VAPBO95292 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
VAPBO95292 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
VAPBO95292 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VAPBO95292 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VAPBO95292 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.77■□□□□ 0.44
VAPBO95292 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
VAPBO95292 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.77■□□□□ 0.44
VAPBO95292 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
VAPBO95292 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VAPBO95292 CROCCP2-202ENST00000412962 2773 ntBASIC17.77■□□□□ 0.44
VAPBO95292 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
VAPBO95292 AL023806.1-201ENST00000603994 1649 ntBASIC17.77■□□□□ 0.44
VAPBO95292 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VAPBO95292 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.77■□□□□ 0.44
VAPBO95292 PCDHA12-202ENST00000613593 2588 ntBASIC17.77■□□□□ 0.44
VAPBO95292 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VAPBO95292 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.77■□□□□ 0.44
VAPBO95292 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VAPBO95292 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
VAPBO95292 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.77■□□□□ 0.44
VAPBO95292 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.77■□□□□ 0.44
VAPBO95292 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VAPBO95292 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.77■□□□□ 0.44
VAPBO95292 KRT18P21-201ENST00000515767 1272 ntBASIC17.77■□□□□ 0.44
VAPBO95292 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
VAPBO95292 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.77■□□□□ 0.44
VAPBO95292 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VAPBO95292 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.77■□□□□ 0.44
VAPBO95292 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.77■□□□□ 0.44
VAPBO95292 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VAPBO95292 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.77■□□□□ 0.44
VAPBO95292 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VAPBO95292 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VAPBO95292 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VAPBO95292 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VAPBO95292 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VAPBO95292 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VAPBO95292 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VAPBO95292 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VAPBO95292 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.76■□□□□ 0.43
VAPBO95292 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VAPBO95292 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
VAPBO95292 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VAPBO95292 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VAPBO95292 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.76■□□□□ 0.43
VAPBO95292 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
VAPBO95292 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
VAPBO95292 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VAPBO95292 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VAPBO95292 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.76■□□□□ 0.43
VAPBO95292 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.76■□□□□ 0.43
VAPBO95292 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VAPBO95292 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.76■□□□□ 0.43
VAPBO95292 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VAPBO95292 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.76■□□□□ 0.43
VAPBO95292 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VAPBO95292 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
VAPBO95292 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VAPBO95292 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.76■□□□□ 0.43
VAPBO95292 BX276092.7-203ENST00000637198 1536 ntBASIC17.76■□□□□ 0.43
VAPBO95292 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
VAPBO95292 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VAPBO95292 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
VAPBO95292 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VAPBO95292 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VAPBO95292 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
VAPBO95292 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VAPBO95292 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VAPBO95292 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VAPBO95292 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VAPBO95292 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VAPBO95292 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VAPBO95292 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.75■□□□□ 0.43
VAPBO95292 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
VAPBO95292 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VAPBO95292 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VAPBO95292 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VAPBO95292 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.75■□□□□ 0.43
VAPBO95292 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms