Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC4O75487 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC4O75487 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC4O75487 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GPC4O75487 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC4O75487 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.74■□□□□ 0.43
GPC4O75487 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.74■□□□□ 0.43
GPC4O75487 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GPC4O75487 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.74■□□□□ 0.43
GPC4O75487 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.74■□□□□ 0.43
GPC4O75487 AC005332.3-201ENST00000589904 676 ntBASIC17.74■□□□□ 0.43
GPC4O75487 GPR32P1-201ENST00000601788 811 ntBASIC17.74■□□□□ 0.43
GPC4O75487 AC010331.1-201ENST00000611423 582 ntBASIC17.74■□□□□ 0.43
GPC4O75487 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC4O75487 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.74■□□□□ 0.43
GPC4O75487 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.74■□□□□ 0.43
GPC4O75487 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC4O75487 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC4O75487 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
GPC4O75487 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC4O75487 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.74■□□□□ 0.43
GPC4O75487 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC4O75487 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC4O75487 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GPC4O75487 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GPC4O75487 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
GPC4O75487 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.73■□□□□ 0.43
GPC4O75487 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GPC4O75487 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.73■□□□□ 0.43
GPC4O75487 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
GPC4O75487 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GPC4O75487 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GPC4O75487 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GPC4O75487 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GPC4O75487 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GPC4O75487 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.73■□□□□ 0.43
GPC4O75487 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.73■□□□□ 0.43
GPC4O75487 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.73■□□□□ 0.43
GPC4O75487 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.73■□□□□ 0.43
GPC4O75487 MIR1224-201ENST00000408193 85 ntBASIC17.73■□□□□ 0.43
GPC4O75487 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.73■□□□□ 0.43
GPC4O75487 KRT18P35-201ENST00000510488 1269 ntBASIC17.73■□□□□ 0.43
GPC4O75487 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GPC4O75487 AL390719.2-201ENST00000606993 987 ntBASIC17.73■□□□□ 0.43
GPC4O75487 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
GPC4O75487 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.73■□□□□ 0.43
GPC4O75487 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.73■□□□□ 0.43
GPC4O75487 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.73■□□□□ 0.43
GPC4O75487 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.73■□□□□ 0.43
GPC4O75487 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.73■□□□□ 0.43
GPC4O75487 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
GPC4O75487 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GPC4O75487 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
GPC4O75487 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.72■□□□□ 0.43
GPC4O75487 AC005332.1-201ENST00000577698 1310 ntBASIC17.72■□□□□ 0.43
GPC4O75487 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.72■□□□□ 0.43
GPC4O75487 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.72■□□□□ 0.43
GPC4O75487 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.72■□□□□ 0.43
GPC4O75487 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
GPC4O75487 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
GPC4O75487 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.72■□□□□ 0.43
GPC4O75487 AL353692.3-201ENST00000407031 1396 ntBASIC17.72■□□□□ 0.43
GPC4O75487 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.72■□□□□ 0.43
GPC4O75487 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
GPC4O75487 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.72■□□□□ 0.43
GPC4O75487 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.72■□□□□ 0.43
GPC4O75487 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
GPC4O75487 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.72■□□□□ 0.43
GPC4O75487 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
GPC4O75487 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.72■□□□□ 0.43
GPC4O75487 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.72■□□□□ 0.43
GPC4O75487 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.72■□□□□ 0.43
GPC4O75487 AC087388.1-201ENST00000571370 1112 ntBASIC17.72■□□□□ 0.43
GPC4O75487 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.72■□□□□ 0.43
GPC4O75487 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
GPC4O75487 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
GPC4O75487 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.72■□□□□ 0.43
GPC4O75487 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.72■□□□□ 0.43
GPC4O75487 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
GPC4O75487 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
GPC4O75487 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms