Protein–RNA interactions for Protein: O60359

CACNG3, Voltage-dependent calcium channel gamma-3 subunit, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNG3O60359 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
CACNG3O60359 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.19■□□□□ 0.5
CACNG3O60359 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACNG3O60359 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CACNG3O60359 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACNG3O60359 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACNG3O60359 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACNG3O60359 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CACNG3O60359 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.19■□□□□ 0.5
CACNG3O60359 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACNG3O60359 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACNG3O60359 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.19■□□□□ 0.5
CACNG3O60359 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACNG3O60359 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CACNG3O60359 PMS2P1-201ENST00000431037 1228 ntBASIC18.19■□□□□ 0.5
CACNG3O60359 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACNG3O60359 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACNG3O60359 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CACNG3O60359 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.19■□□□□ 0.5
CACNG3O60359 LETM1P2-201ENST00000597330 2178 ntBASIC18.19■□□□□ 0.5
CACNG3O60359 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CACNG3O60359 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACNG3O60359 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CACNG3O60359 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACNG3O60359 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CACNG3O60359 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACNG3O60359 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
CACNG3O60359 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CACNG3O60359 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CACNG3O60359 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 PMPCAP1-201ENST00000508114 1576 ntBASIC18.18■□□□□ 0.5
CACNG3O60359 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CACNG3O60359 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
CACNG3O60359 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.18■□□□□ 0.5
CACNG3O60359 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.18■□□□□ 0.5
CACNG3O60359 RPS2P1-201ENST00000434010 821 ntBASIC18.18■□□□□ 0.5
CACNG3O60359 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.18■□□□□ 0.5
CACNG3O60359 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.18■□□□□ 0.5
CACNG3O60359 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 NKAPP1-205ENST00000585790 367 ntBASIC18.18■□□□□ 0.5
CACNG3O60359 AC023511.2-201ENST00000618803 211 ntBASIC18.18■□□□□ 0.5
CACNG3O60359 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CACNG3O60359 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CACNG3O60359 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CACNG3O60359 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNG3O60359 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.17■□□□□ 0.5
CACNG3O60359 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CACNG3O60359 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNG3O60359 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CACNG3O60359 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CACNG3O60359 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CACNG3O60359 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNG3O60359 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CACNG3O60359 MIR574-201ENST00000385209 96 ntBASIC18.17■□□□□ 0.5
CACNG3O60359 COX5BP2-201ENST00000392354 334 ntBASIC18.17■□□□□ 0.5
CACNG3O60359 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.17■□□□□ 0.5
CACNG3O60359 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CACNG3O60359 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CACNG3O60359 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.17■□□□□ 0.5
CACNG3O60359 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.17■□□□□ 0.5
CACNG3O60359 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNG3O60359 AD001527.2-201ENST00000622994 785 ntBASIC18.17■□□□□ 0.5
CACNG3O60359 AC116407.3-201ENST00000623905 1129 ntBASIC18.17■□□□□ 0.5
CACNG3O60359 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNG3O60359 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNG3O60359 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNG3O60359 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNG3O60359 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNG3O60359 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNG3O60359 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CACNG3O60359 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.17■□□□□ 0.5
CACNG3O60359 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
CACNG3O60359 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNG3O60359 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNG3O60359 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CACNG3O60359 AC079776.2-201ENST00000641154 1609 ntBASIC18.16■□□□□ 0.5
CACNG3O60359 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNG3O60359 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.16■□□□□ 0.5
CACNG3O60359 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CACNG3O60359 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNG3O60359 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.16■□□□□ 0.5
CACNG3O60359 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CACNG3O60359 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms