Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LCMT2O60294 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LCMT2O60294 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LCMT2O60294 FZD10-202ENST00000539839 3282 ntBASIC16.9■□□□□ 0.3
LCMT2O60294 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCMT2O60294 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCMT2O60294 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LCMT2O60294 NUS1P2-201ENST00000417358 873 ntBASIC16.9■□□□□ 0.3
LCMT2O60294 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.9■□□□□ 0.3
LCMT2O60294 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.9■□□□□ 0.3
LCMT2O60294 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.9■□□□□ 0.3
LCMT2O60294 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.9■□□□□ 0.3
LCMT2O60294 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.9■□□□□ 0.3
LCMT2O60294 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCMT2O60294 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCMT2O60294 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LCMT2O60294 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCMT2O60294 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.9■□□□□ 0.3
LCMT2O60294 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCMT2O60294 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCMT2O60294 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.9■□□□□ 0.3
LCMT2O60294 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LCMT2O60294 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LCMT2O60294 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.9■□□□□ 0.3
LCMT2O60294 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LCMT2O60294 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
LCMT2O60294 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LCMT2O60294 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LCMT2O60294 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LCMT2O60294 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LCMT2O60294 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.89■□□□□ 0.29
LCMT2O60294 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LCMT2O60294 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.89■□□□□ 0.29
LCMT2O60294 KRT16P4-201ENST00000453883 522 ntBASIC16.89■□□□□ 0.29
LCMT2O60294 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.89■□□□□ 0.29
LCMT2O60294 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.89■□□□□ 0.29
LCMT2O60294 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.89■□□□□ 0.29
LCMT2O60294 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.89■□□□□ 0.29
LCMT2O60294 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LCMT2O60294 AC019129.2-201ENST00000609837 1235 ntBASIC16.89■□□□□ 0.29
LCMT2O60294 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LCMT2O60294 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.89■□□□□ 0.29
LCMT2O60294 AC114341.1-201ENST00000618070 349 ntBASIC16.89■□□□□ 0.29
LCMT2O60294 LINC01451-201ENST00000623792 534 ntBASIC16.89■□□□□ 0.29
LCMT2O60294 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LCMT2O60294 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.89■□□□□ 0.29
LCMT2O60294 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LCMT2O60294 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.89■□□□□ 0.29
LCMT2O60294 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LCMT2O60294 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LCMT2O60294 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.89■□□□□ 0.29
LCMT2O60294 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
LCMT2O60294 AL049757.1-201ENST00000616842 1596 ntBASIC16.89■□□□□ 0.29
LCMT2O60294 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCMT2O60294 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.88■□□□□ 0.29
LCMT2O60294 AC133963.1-201ENST00000504166 1679 ntBASIC16.88■□□□□ 0.29
LCMT2O60294 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCMT2O60294 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.88■□□□□ 0.29
LCMT2O60294 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCMT2O60294 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCMT2O60294 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCMT2O60294 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LCMT2O60294 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCMT2O60294 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCMT2O60294 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LCMT2O60294 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCMT2O60294 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCMT2O60294 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCMT2O60294 TSPY19P-201ENST00000418461 509 ntBASIC16.88■□□□□ 0.29
LCMT2O60294 AC005104.2-201ENST00000427818 678 ntBASIC16.88■□□□□ 0.29
LCMT2O60294 TSPY18P-201ENST00000441642 509 ntBASIC16.88■□□□□ 0.29
LCMT2O60294 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCMT2O60294 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.88■□□□□ 0.29
LCMT2O60294 PRELID1P1-202ENST00000567272 903 ntBASIC16.88■□□□□ 0.29
LCMT2O60294 AC109462.3-201ENST00000573934 613 ntBASIC16.88■□□□□ 0.29
LCMT2O60294 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.88■□□□□ 0.29
LCMT2O60294 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.88■□□□□ 0.29
LCMT2O60294 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCMT2O60294 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.88■□□□□ 0.29
LCMT2O60294 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LCMT2O60294 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCMT2O60294 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCMT2O60294 HLA-J-201ENST00000462773 1622 ntBASIC16.88■□□□□ 0.29
LCMT2O60294 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.88■□□□□ 0.29
LCMT2O60294 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCMT2O60294 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LCMT2O60294 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LCMT2O60294 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.87■□□□□ 0.29
LCMT2O60294 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.87■□□□□ 0.29
LCMT2O60294 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCMT2O60294 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
LCMT2O60294 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCMT2O60294 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LCMT2O60294 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LCMT2O60294 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LCMT2O60294 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.87■□□□□ 0.29
LCMT2O60294 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCMT2O60294 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCMT2O60294 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LCMT2O60294 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms