Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH7O60245 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH7O60245 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH7O60245 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH7O60245 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH7O60245 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH7O60245 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDH7O60245 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH7O60245 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDH7O60245 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH7O60245 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH7O60245 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH7O60245 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH7O60245 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PCDH7O60245 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.9■□□□□ 0.3
PCDH7O60245 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDH7O60245 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.9■□□□□ 0.3
PCDH7O60245 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDH7O60245 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDH7O60245 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH7O60245 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH7O60245 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCDH7O60245 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH7O60245 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH7O60245 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH7O60245 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH7O60245 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH7O60245 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH7O60245 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
PCDH7O60245 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH7O60245 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.89■□□□□ 0.3
PCDH7O60245 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDH7O60245 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
PCDH7O60245 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDH7O60245 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PCDH7O60245 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDH7O60245 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH7O60245 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDH7O60245 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH7O60245 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH7O60245 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH7O60245 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH7O60245 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDH7O60245 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDH7O60245 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PCDH7O60245 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDH7O60245 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDH7O60245 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.89■□□□□ 0.29
PCDH7O60245 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH7O60245 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDH7O60245 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDH7O60245 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDH7O60245 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH7O60245 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH7O60245 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH7O60245 AC080080.1-201ENST00000625121 2420 ntBASIC16.89■□□□□ 0.29
PCDH7O60245 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PCDH7O60245 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDH7O60245 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDH7O60245 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDH7O60245 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDH7O60245 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH7O60245 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
PCDH7O60245 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH7O60245 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH7O60245 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDH7O60245 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PCDH7O60245 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDH7O60245 CROCCP2-202ENST00000412962 2773 ntBASIC16.88■□□□□ 0.29
PCDH7O60245 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH7O60245 SIRPAP1-201ENST00000448467 1770 ntBASIC16.88■□□□□ 0.29
PCDH7O60245 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH7O60245 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH7O60245 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDH7O60245 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
PCDH7O60245 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCDH7O60245 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDH7O60245 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PCDH7O60245 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PCDH7O60245 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH7O60245 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDH7O60245 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms