Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
MSH4O15457 AL139288.1-201ENST00000623748 933 ntBASIC19.81■□□□□ 0.76
MSH4O15457 AC148477.8-201ENST00000624298 468 ntBASIC19.81■□□□□ 0.76
MSH4O15457 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MSH4O15457 SIGLEC16-201ENST00000599858 1437 ntBASIC19.81■□□□□ 0.76
MSH4O15457 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.81■□□□□ 0.76
MSH4O15457 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MSH4O15457 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MSH4O15457 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
MSH4O15457 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.81■□□□□ 0.76
MSH4O15457 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.81■□□□□ 0.76
MSH4O15457 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MSH4O15457 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MSH4O15457 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
MSH4O15457 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MSH4O15457 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MSH4O15457 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MSH4O15457 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSH4O15457 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.8■□□□□ 0.76
MSH4O15457 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MSH4O15457 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
MSH4O15457 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSH4O15457 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.8■□□□□ 0.76
MSH4O15457 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSH4O15457 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
MSH4O15457 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MSH4O15457 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSH4O15457 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSH4O15457 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSH4O15457 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MSH4O15457 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.8■□□□□ 0.76
MSH4O15457 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSH4O15457 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
MSH4O15457 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSH4O15457 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.8■□□□□ 0.76
MSH4O15457 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
MSH4O15457 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
MSH4O15457 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.8■□□□□ 0.76
MSH4O15457 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.8■□□□□ 0.76
MSH4O15457 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.8■□□□□ 0.76
MSH4O15457 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.8■□□□□ 0.76
MSH4O15457 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.8■□□□□ 0.76
MSH4O15457 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.8■□□□□ 0.76
MSH4O15457 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MSH4O15457 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MSH4O15457 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MSH4O15457 HLA-J-201ENST00000462773 1622 ntBASIC19.8■□□□□ 0.76
MSH4O15457 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
MSH4O15457 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.79■□□□□ 0.76
MSH4O15457 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MSH4O15457 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MSH4O15457 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
MSH4O15457 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MSH4O15457 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MSH4O15457 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.79■□□□□ 0.76
MSH4O15457 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MSH4O15457 AC003669.1-201ENST00000334569 611 ntBASIC19.79■□□□□ 0.76
MSH4O15457 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.79■□□□□ 0.76
MSH4O15457 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
MSH4O15457 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
MSH4O15457 RNPS1P1-201ENST00000507437 918 ntBASIC19.79■□□□□ 0.76
MSH4O15457 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MSH4O15457 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.79■□□□□ 0.76
MSH4O15457 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.79■□□□□ 0.76
MSH4O15457 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.79■□□□□ 0.76
MSH4O15457 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MSH4O15457 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.79■□□□□ 0.76
MSH4O15457 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.79■□□□□ 0.76
MSH4O15457 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
MSH4O15457 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
MSH4O15457 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MSH4O15457 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.79■□□□□ 0.76
MSH4O15457 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MSH4O15457 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
MSH4O15457 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.79■□□□□ 0.76
MSH4O15457 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
MSH4O15457 AC133963.1-201ENST00000504166 1679 ntBASIC19.78■□□□□ 0.76
MSH4O15457 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.78■□□□□ 0.76
MSH4O15457 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MSH4O15457 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
MSH4O15457 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MSH4O15457 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MSH4O15457 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
MSH4O15457 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
MSH4O15457 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MSH4O15457 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.78■□□□□ 0.76
MSH4O15457 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.78■□□□□ 0.76
MSH4O15457 KLF4P1-201ENST00000412782 1185 ntBASIC19.78■□□□□ 0.76
MSH4O15457 AL020989.1-201ENST00000422979 469 ntBASIC19.78■□□□□ 0.76
MSH4O15457 KRT18P67-201ENST00000432816 1264 ntBASIC19.78■□□□□ 0.76
MSH4O15457 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
MSH4O15457 HNRNPDP1-201ENST00000439535 754 ntBASIC19.78■□□□□ 0.76
MSH4O15457 AC018712.1-201ENST00000455767 687 ntBASIC19.78■□□□□ 0.76
MSH4O15457 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
MSH4O15457 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
MSH4O15457 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.78■□□□□ 0.76
MSH4O15457 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MSH4O15457 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MSH4O15457 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.78■□□□□ 0.76
MSH4O15457 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms