Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MID1O15344 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MID1O15344 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.66■□□□□ 0.42
MID1O15344 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MID1O15344 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MID1O15344 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.66■□□□□ 0.42
MID1O15344 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MID1O15344 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MID1O15344 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MID1O15344 MED15P5-201ENST00000423150 992 ntBASIC17.66■□□□□ 0.42
MID1O15344 KRT18P27-201ENST00000427733 1299 ntBASIC17.66■□□□□ 0.42
MID1O15344 AC092865.5-201ENST00000545435 363 ntBASIC17.66■□□□□ 0.42
MID1O15344 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MID1O15344 MIR1199-201ENST00000621445 119 ntBASIC17.66■□□□□ 0.42
MID1O15344 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.66■□□□□ 0.42
MID1O15344 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.66■□□□□ 0.42
MID1O15344 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MID1O15344 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
MID1O15344 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MID1O15344 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MID1O15344 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MID1O15344 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MID1O15344 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MID1O15344 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.66■□□□□ 0.42
MID1O15344 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MID1O15344 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
MID1O15344 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
MID1O15344 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MID1O15344 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MID1O15344 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MID1O15344 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MID1O15344 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.65■□□□□ 0.42
MID1O15344 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
MID1O15344 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.65■□□□□ 0.42
MID1O15344 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.65■□□□□ 0.42
MID1O15344 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MID1O15344 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
MID1O15344 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MID1O15344 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.65■□□□□ 0.42
MID1O15344 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.65■□□□□ 0.42
MID1O15344 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MID1O15344 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.65■□□□□ 0.42
MID1O15344 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.65■□□□□ 0.42
MID1O15344 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.65■□□□□ 0.42
MID1O15344 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.65■□□□□ 0.42
MID1O15344 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.65■□□□□ 0.42
MID1O15344 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MID1O15344 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.65■□□□□ 0.42
MID1O15344 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
MID1O15344 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MID1O15344 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.65■□□□□ 0.42
MID1O15344 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MID1O15344 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.65■□□□□ 0.42
MID1O15344 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MID1O15344 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
MID1O15344 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.65■□□□□ 0.42
MID1O15344 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MID1O15344 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.65■□□□□ 0.42
MID1O15344 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MID1O15344 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MID1O15344 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
MID1O15344 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MID1O15344 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MID1O15344 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MID1O15344 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MID1O15344 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.64■□□□□ 0.41
MID1O15344 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MID1O15344 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
MID1O15344 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MID1O15344 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MID1O15344 AC003669.1-201ENST00000334569 611 ntBASIC17.64■□□□□ 0.41
MID1O15344 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MID1O15344 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.64■□□□□ 0.41
MID1O15344 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.64■□□□□ 0.41
MID1O15344 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
MID1O15344 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.64■□□□□ 0.41
MID1O15344 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
MID1O15344 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
MID1O15344 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MID1O15344 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
MID1O15344 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MID1O15344 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms