Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.08■□□□□ 0.16
SMAD9O15198 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMAD9O15198 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMAD9O15198 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMAD9O15198 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
SMAD9O15198 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.08■□□□□ 0.16
SMAD9O15198 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMAD9O15198 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SMAD9O15198 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMAD9O15198 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SMAD9O15198 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD9O15198 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD9O15198 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.07■□□□□ 0.16
SMAD9O15198 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD9O15198 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SMAD9O15198 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD9O15198 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SMAD9O15198 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
SMAD9O15198 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.07■□□□□ 0.16
SMAD9O15198 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.07■□□□□ 0.16
SMAD9O15198 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.07■□□□□ 0.16
SMAD9O15198 TPSP2-201ENST00000561760 610 ntBASIC16.07■□□□□ 0.16
SMAD9O15198 MIR3180-1-201ENST00000580374 94 ntBASIC16.07■□□□□ 0.16
SMAD9O15198 MIR3180-3-201ENST00000584616 94 ntBASIC16.07■□□□□ 0.16
SMAD9O15198 AC092119.3-201ENST00000612618 583 ntBASIC16.07■□□□□ 0.16
SMAD9O15198 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.07■□□□□ 0.16
SMAD9O15198 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SMAD9O15198 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
SMAD9O15198 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD9O15198 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.07■□□□□ 0.16
SMAD9O15198 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD9O15198 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD9O15198 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD9O15198 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.07■□□□□ 0.16
SMAD9O15198 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD9O15198 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD9O15198 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD9O15198 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.07■□□□□ 0.16
SMAD9O15198 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD9O15198 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD9O15198 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD9O15198 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD9O15198 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD9O15198 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD9O15198 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD9O15198 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD9O15198 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SMAD9O15198 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.06■□□□□ 0.16
SMAD9O15198 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.06■□□□□ 0.16
SMAD9O15198 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.06■□□□□ 0.16
SMAD9O15198 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SMAD9O15198 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.06■□□□□ 0.16
SMAD9O15198 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SMAD9O15198 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD9O15198 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.06■□□□□ 0.16
SMAD9O15198 FLJ13224-201ENST00000313737 1514 ntBASIC16.06■□□□□ 0.16
SMAD9O15198 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD9O15198 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD9O15198 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
SMAD9O15198 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD9O15198 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD9O15198 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD9O15198 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.06■□□□□ 0.16
SMAD9O15198 AL845331.1-201ENST00000424978 1190 ntBASIC16.06■□□□□ 0.16
SMAD9O15198 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.06■□□□□ 0.16
SMAD9O15198 DRAXINP1-201ENST00000437611 948 ntBASIC16.06■□□□□ 0.16
SMAD9O15198 MTCL1P1-201ENST00000446207 792 ntBASIC16.06■□□□□ 0.16
SMAD9O15198 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.06■□□□□ 0.16
SMAD9O15198 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.06■□□□□ 0.16
SMAD9O15198 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SMAD9O15198 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SMAD9O15198 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.06■□□□□ 0.16
SMAD9O15198 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
SMAD9O15198 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD9O15198 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SMAD9O15198 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD9O15198 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD9O15198 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SMAD9O15198 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD9O15198 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SMAD9O15198 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SMAD9O15198 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD9O15198 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD9O15198 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD9O15198 AC138028.4-201ENST00000564984 1845 ntBASIC16.05■□□□□ 0.16
SMAD9O15198 AC020916.1-201ENST00000587762 1774 ntBASIC16.05■□□□□ 0.16
SMAD9O15198 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.05■□□□□ 0.16
SMAD9O15198 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.05■□□□□ 0.16
SMAD9O15198 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.05■□□□□ 0.16
SMAD9O15198 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD9O15198 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SMAD9O15198 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms