Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SOX1O00570 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SOX1O00570 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SOX1O00570 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SOX1O00570 BCYRN1-201ENST00000418539 200 ntBASIC18.64■□□□□ 0.57
SOX1O00570 LINC00982-205ENST00000420957 435 ntBASIC18.64■□□□□ 0.57
SOX1O00570 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SOX1O00570 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SOX1O00570 API5-211ENST00000534695 560 ntTSL 5 BASIC18.64■□□□□ 0.57
SOX1O00570 RAB43P1-201ENST00000561790 589 ntBASIC18.64■□□□□ 0.57
SOX1O00570 RARRES2P8-201ENST00000566335 367 ntBASIC18.64■□□□□ 0.57
SOX1O00570 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.64■□□□□ 0.57
SOX1O00570 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.64■□□□□ 0.57
SOX1O00570 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SOX1O00570 AIRN-201ENST00000601203 4374 ntBASIC18.64■□□□□ 0.57
SOX1O00570 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SOX1O00570 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.64■□□□□ 0.57
SOX1O00570 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX1O00570 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX1O00570 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.63■□□□□ 0.57
SOX1O00570 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX1O00570 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SOX1O00570 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX1O00570 AC132938.6-201ENST00000623828 1655 ntBASIC18.63■□□□□ 0.57
SOX1O00570 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SOX1O00570 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX1O00570 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX1O00570 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX1O00570 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX1O00570 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX1O00570 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.63■□□□□ 0.57
SOX1O00570 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SOX1O00570 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX1O00570 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.63■□□□□ 0.57
SOX1O00570 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SOX1O00570 AC098614.1-201ENST00000368528 745 ntBASIC18.63■□□□□ 0.57
SOX1O00570 AC027369.6-201ENST00000525520 931 ntBASIC18.63■□□□□ 0.57
SOX1O00570 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.63■□□□□ 0.57
SOX1O00570 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.63■□□□□ 0.57
SOX1O00570 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SOX1O00570 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX1O00570 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SOX1O00570 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SOX1O00570 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX1O00570 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.63■□□□□ 0.57
SOX1O00570 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX1O00570 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.63■□□□□ 0.57
SOX1O00570 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX1O00570 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOX1O00570 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SOX1O00570 AC141586.3-201ENST00000562166 1838 ntBASIC18.63■□□□□ 0.57
SOX1O00570 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOX1O00570 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SOX1O00570 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SOX1O00570 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOX1O00570 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.62■□□□□ 0.57
SOX1O00570 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOX1O00570 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
SOX1O00570 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOX1O00570 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SOX1O00570 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SOX1O00570 DGCR5-201ENST00000399539 862 ntBASIC18.62■□□□□ 0.57
SOX1O00570 AL512384.1-201ENST00000406683 331 ntBASIC18.62■□□□□ 0.57
SOX1O00570 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SOX1O00570 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.62■□□□□ 0.57
SOX1O00570 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.62■□□□□ 0.57
SOX1O00570 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.62■□□□□ 0.57
SOX1O00570 IGHV3-62-201ENST00000520057 340 ntBASIC18.62■□□□□ 0.57
SOX1O00570 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.62■□□□□ 0.57
SOX1O00570 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.62■□□□□ 0.57
SOX1O00570 MIR6787-201ENST00000616675 61 ntBASIC18.62■□□□□ 0.57
SOX1O00570 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.62■□□□□ 0.57
SOX1O00570 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SOX1O00570 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.62■□□□□ 0.57
SOX1O00570 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOX1O00570 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOX1O00570 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.62■□□□□ 0.57
SOX1O00570 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOX1O00570 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
SOX1O00570 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOX1O00570 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOX1O00570 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SOX1O00570 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOX1O00570 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOX1O00570 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.62■□□□□ 0.57
SOX1O00570 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SOX1O00570 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.62■□□□□ 0.57
SOX1O00570 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SOX1O00570 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.61■□□□□ 0.57
SOX1O00570 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SOX1O00570 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SOX1O00570 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SOX1O00570 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SOX1O00570 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SOX1O00570 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SOX1O00570 AKAP8P1-201ENST00000434743 1349 ntBASIC18.61■□□□□ 0.57
SOX1O00570 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SOX1O00570 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.61■□□□□ 0.57
SOX1O00570 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SOX1O00570 AC092933.1-201ENST00000393644 945 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms