Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 ECEL1P2-202ENST00000465689 757 ntBASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM49D1C9J1S8 KRT17P2-201ENST00000300992 1314 ntBASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 HMGA1P5-201ENST00000412453 271 ntBASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 NAPSB-206ENST00000562112 1266 ntBASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM49D1C9J1S8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 LYSMD4-203ENST00000378904 2122 ntBASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 TSPY15P-201ENST00000457163 923 ntBASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 AC024563.2-201ENST00000603282 481 ntBASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM49D1C9J1S8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.71■□□□□ 0.42
TRIM49D1C9J1S8 AC060834.1-201ENST00000443027 2032 ntBASIC17.71■□□□□ 0.42
TRIM49D1C9J1S8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TRIM49D1C9J1S8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM49D1C9J1S8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms